DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp64D and ncd

DIOPT Version :10

Sequence 1:NP_523934.1 Gene:Klp64D / 38611 FlyBaseID:FBgn0004380 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_476651.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster


Alignment Length:376 Identity:128/376 - (34%)
Similarity:200/376 - (53%) Gaps:29/376 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NVRVVVRTRPMDKNELSAGALSAISVDKINRAITVMKPNATANEPPKTYYFDNVFDGGSNQMDLY 84
            |:||..|.||..::|.:....:....|:....:..:...|.:....:.:.||.||...|:|.|::
  Fly   348 NIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIF 412

  Fly    85 VDTARPIVDKVLEGYNGTILAYGQTGTGKTYTMSGNPDSPQTKGIIPNAFAHIFGHIAKAKE-NQ 148
             :...|::...|:|||..|.||||||:||||||.|.|:|   .|:||.....:|..|...:. ..
  Fly   413 -EMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPES---VGVIPRTVDLLFDSIRGYRNLGW 473

  Fly   149 KFLVRVSYMEIYNEEVRDLLGKDVGKSLEVK----ERPDIGVFVKDLSGYVVHNADDLENIMRLG 209
            ::.::.:::|||||.:.|||..: .|.:|::    .:.||  :|.:::...|.:.:.|.::|...
  Fly   474 EYEIKATFLEIYNEVLYDLLSNE-QKDMEIRMAKNNKNDI--YVSNITEETVLDPNHLRHLMHTA 535

  Fly   210 NKNRAVGATKMNQESSRSHAIFSITVERSELG-EGDVQHVRMGKLQLVDLAGSERQSKTQASGQR 273
            ..|||..:|..|:.||||||:..:.:    :| ..:.|.:.:|.:.|||||||| ..||..   |
  Fly   536 KMNRATASTAGNERSSRSHAVTKLEL----IGRHAEKQEISVGSINLVDLAGSE-SPKTST---R 592

  Fly   274 LKEATKINLSLSVLGNVISALVDGKSTHIPYRNSKLTRLLQDSLGGNSKTVMCATISPADSNYME 338
            :.|...||.|||.|.|||.||:. |..||||||||||.||..||||||||:|...:||....:.|
  Fly   593 MTETKNINRSLSELTNVILALLQ-KQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQE 656

  Fly   339 TISTLRYASRAKNIQNRMHINEEPKDALLRHFQEEIARLRKQLEEGDSLEE 389
            ::.:||:|:..    |...:.:..::   |:....:|....|.....|.::
  Fly   657 SVKSLRFAASV----NSCKMTKAKRN---RYLNNSVANSSTQSNNSGSFDK 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp64DNP_523934.1 KISc_KIF3 19..352 CDD:276822 123/337 (36%)
Smc <433..>578 CDD:440809
ncdNP_476651.1 PRK03918 <204..350 CDD:235175 1/1 (100%)
KISc_C_terminal 346..672 CDD:276817 124/343 (36%)
Blue background indicates that the domain is not in the aligned region.

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