DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp64D and Kif5a

DIOPT Version :10

Sequence 1:NP_523934.1 Gene:Klp64D / 38611 FlyBaseID:FBgn0004380 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_997688.1 Gene:Kif5a / 314906 RGDID:1303035 Length:1027 Species:Rattus norvegicus


Alignment Length:736 Identity:226/736 - (30%)
Similarity:345/736 - (46%) Gaps:146/736 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AQLDDEIENVRVVVRTRPMDKNELSAGALSAISVDKINRAITVMKPNATANEPPKTYYFDNVFDG 76
            |:.::|. :::|:.|.||:::.|:..|       ||.   |.:.:.:.:.....|.|.||.||..
  Rat     2 AETNNEC-SIKVLCRFRPLNQAEILRG-------DKF---IPIFQGDDSVIIGGKPYVFDRVFPP 55

  Fly    77 GSNQMDLYVDTARPIVDKVLEGYNGTILAYGQTGTGKTYTMSGNPDSPQTKGIIPNAFAHIFGHI 141
            .:.|..:|...|..||..||.||||||.|||||.:|||:||.|....||..||||.....||.||
  Rat    56 NTTQEQVYHACAMQIVKDVLAGYNGTIFAYGQTSSGKTHTMEGKLHDPQLMGIIPRIARDIFNHI 120

  Fly   142 AKAKENQKFLVRVSYMEIYNEEVRDLLGKDVGK-SLEVKERPDIGVFVKDLSGYVVHNADDLENI 205
            ....||.:|.::|||.|||.:::||||  ||.| :|.|.|..:...||:..:...|.:.:::.::
  Rat   121 YSMDENLEFHIKVSYFEIYLDKIRDLL--DVTKTNLSVHEDKNRVPFVRGCTERFVSSPEEILDV 183

  Fly   206 MRLGNKNRAVGATKMNQESSRSHAIFSITVERSELGEGDVQHVRMGKLQLVDLAGSERQSKTQAS 270
            :..|..||.|..|.||:.|||||:||.|.:::..:   :.:....|||.|.||||||:.|||.|.
  Rat   184 IDEGKSNRHVAVTNMNEHSSRSHSIFLINIKQENI---ETEQKLSGKLYLADLAGSEKVSKTGAE 245

  Fly   271 GQRLKEATKINLSLSVLGNVISALVDGKSTHIPYRNSKLTRLLQDSLGGNSKTVMCATISPADSN 335
            |..|.||..||.|||.||||||||.:|..:::|||:||:||:||||||||.:|.|....||:..|
  Rat   246 GAVLDEAKNINKSLSALGNVISALAEGTKSYVPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYN 310

  Fly   336 YMETISTLRYASRAKNIQNRMHIN------------EEPKDALLRHFQEEIARLRKQL---EEGD 385
            ..||.|||.:..|||.|:|...:|            |:.|:. .:..:|.||:|..:|   ..|:
  Rat   311 DAETKSTLMFGQRAKTIKNTASVNLELTAEQWKKKYEKEKEK-TKAQKETIAKLEAELSRWRNGE 374

  Fly   386 SL-EEEPPSSEEEEDTADDELEAPLEIELESSTIQAVEKKPKKKREKTDAEKEELAKRKNEHQKE 449
            :: |.|..:.|:....|:...|.|:.   ::|:|  |.:...::|:|.:.|...|.|:.::...|
  Rat   375 NVPETERLAGEDSALAAEICEETPVN---DNSSI--VVRIAPEERQKYEEEIRRLYKQLDDKDDE 434

  Fly   450 IEHAKTEQETLRNKLVSLEGKILVG----------------GENLLEKAQTQELL---------L 489
            |.......|.|:.:::..| ::||.                .||...|.:.:|:|         .
  Rat   435 INQQSQLIEKLKQQMLDQE-ELLVSTRGDNEKVQRELSHLQSENDAAKEEVKEVLQALEELAVNY 498

  Fly   490 EQSIAELEQHEKSEEALKQTLQQKATERIDIEERYSTLQDASTGITKKIHRVMQMLM-------- 546
            :|...|:|:..:..:.|...|.||....:.:|.....||:.|....|:|..|:..||        
  Rat   499 DQKSQEVEEKSQQNQLLVDELSQKVATMLSLESEPQRLQEVSGHQRKRIAEVLNGLMKDLSEFSV 563

  Fly   547 -----------------------------GVKSE----------LADQQQEHQREKEGIYENIRS 572
                                         .:|||          |.:.|.|..|:.|       .
  Rat   564 IVGNGEIKLPVEISGAIEEEFTVARLYISKIKSEVKSVVKRCRQLENLQVECHRKME-------V 621

  Fly   573 LSRELALCELVLNSYVPK-----EYQSMI--------NQYTHWNEDIGEWQLKCVAYTGNNMRKH 624
            ..|||:.|:|:::.:..|     ||...:        ..|...::::.:.|.:            
  Rat   622 TGRELSSCQLLISQHEAKIRSLTEYMQTVELKKRHLEESYDSLSDELAKLQAQ------------ 674

  Fly   625 ISAHKTS--GKEPDFLDLSHV 643
            .:.|:.:  .||||..|...|
  Rat   675 ETVHEVALKDKEPDTQDAEEV 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp64DNP_523934.1 KISc_KIF3 19..352 CDD:276822 146/333 (44%)
Smc <433..>578 CDD:440809 41/216 (19%)
Kif5aNP_997688.1 KISc_KHC_KIF5 7..327 CDD:276820 147/335 (44%)
Microtubule-binding. /evidence=ECO:0000255 174..315 69/143 (48%)
Necessary for interaction with ZFYVE27. /evidence=ECO:0000250|UniProtKB:P33175 271..361 35/90 (39%)
Interaction with BICD2. /evidence=ECO:0000250|UniProtKB:Q12840 353..1027 73/368 (20%)
PRK03918 <409..920 CDD:235175 58/307 (19%)
Khc_CBD_cc 832..901 CDD:467880
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 906..936
Globular. /evidence=ECO:0000255 907..1027
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.