DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp64D and Kif20b

DIOPT Version :10

Sequence 1:NP_523934.1 Gene:Klp64D / 38611 FlyBaseID:FBgn0004380 Length:677 Species:Drosophila melanogaster
Sequence 2:XP_006231343.1 Gene:Kif20b / 309523 RGDID:1308497 Length:1781 Species:Rattus norvegicus


Alignment Length:784 Identity:191/784 - (24%)
Similarity:321/784 - (40%) Gaps:213/784 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ANAGTTAQLDDEIEN-VRVVVRTRPMDKNELSAGALSAISV-DKINRAITVMKPNA--------T 60
            ||.|..:.   |.:| ::|.:|.||..::|....|...:.| |  ::.:.:..|.:        :
  Rat    46 ANPGANSL---ESKNYLQVCLRIRPFTQSEKGHEAEGCVQVLD--SQTVLLKDPQSILGHLSEKS 105

  Fly    61 ANEPPKTYYFDNVFDGGSNQMDLYVDTARPIVDKVLEGYNGTILAYGQTGTGKTYTMSGNPDSPQ 125
            :.:..:.:.|..||...::|.:.:.......|..:|:|::..|..||.|.:|||||..|   :.:
  Rat   106 SGQMAQKFSFSRVFGPETSQKEFFQGCIMQPVKDLLKGHSRLIFTYGLTNSGKTYTFQG---TEE 167

  Fly   126 TKGIIPNAFAHIF---------------------------------------------------- 138
            ..||:|.....:|                                                    
  Rat   168 NIGILPRTLNVLFDSLQERLYTKMSFKPHRCREYLQLSSDQEKEESANKNTLLRQIKEVTIHNDS 232

  Fly   139 -----GHIAKA-------------------KENQKFLVRVSYMEIYNEEVRDLLGKDVGKSLEVK 179
                 |.:..:                   .:|.|:.|.||:.|||||.:.||.   |..|.:::
  Rat   233 YDILCGRLTNSLTIPEFEETMNNCEQSSLNVDNIKYSVWVSFFEIYNESIYDLF---VPVSSKLQ 294

  Fly   180 ERPDIGV--------FVKDLSGYVVHNADDLENIMRLGNKNRAVGATKMNQESSRSHAIFSITVE 236
            :|..:.:        |:|||....|.::.:...:::||.|:::|..||:|..|||||:||:|.:.
  Rat   295 KRKMLRLSQDVKGYSFIKDLQWIQVSDSKEAYRLLKLGVKHQSVAFTKLNNASSRSHSIFTIRIL 359

  Fly   237 RSELGEGDVQHV-RMGKLQLVDLAGSERQSKTQASGQRLKEATKINLSLSVLGNVISALVDGKST 300
            :.|  :.::..| |:.:|.|.|||||||..|||:.|:||:||..||.||..||..||.|.:...:
  Rat   360 QIE--DSEIPRVTRVSELSLCDLAGSERSMKTQSEGERLREAGNINTSLLTLGKCISVLKNSDKS 422

  Fly   301 ----HIPYRNSKLTRLLQDSLGGNSKTVMCATISPADSNYMETISTLRYASRAK----------- 350
                |:|:|.||||...|....|..|..|...||...|.|.||::.|::::.|:           
  Rat   423 KIQQHVPFRESKLTHYFQSFFTGKGKICMIINISQCCSAYDETLNVLKFSTVAQKVYVPDTLSSS 487

  Fly   351 ------------------NIQNRMHINEEPKDALLRHFQEEIARLRKQLEEGDSLEEEPPSSEEE 397
                              |:.|:: :|.:.|.....:..|::......:|:   |||...:...|
  Rat   488 QEKSFGSTKSLQDVSLGSNLDNKI-LNVKRKTVSWENSLEDVVENEDLVED---LEENEETQNME 548

  Fly   398 EDTADDELEAPLEIELESSTIQAVEKKPKK---------------KREKTDAE---KEELAKRKN 444
            .:..|::.:.|    ||...:.|...|.||               |:||...|   :||:.:...
  Rat   549 TELTDEDSDKP----LEEGGVCAGHGKNKKLLDLIENLKKRLINEKKEKLTLEFKIREEVTQEFT 609

  Fly   445 EH--QKEIEHAKTEQETLRNKLVSLEG---------KILVG--GENLLEKAQ---TQELLLEQSI 493
            ::  |:|.:.    :|||.::...||.         |.|||  ||:..|.|.   |.||..|:| 
  Rat   610 QYWSQREADF----KETLLHEREILEENAERRLAIFKDLVGKPGESQDEPASRFCTMELETEES- 669

  Fly   494 AELEQHEKSEEALKQTLQQKATE---RIDIEERYSTL----QDASTGITKKIHRVMQMLMGVKSE 551
                .:....|.:..:|:...|:   :.::...|.|.    |:|...:..|.::|...|...|.|
  Rat   670 ----HNYVGVEDIFDSLEDDVTDIKKQAELAHLYITSLVDPQEAIACLQLKYNQVKAELAETKEE 730

  Fly   552 LADQQQE-HQREKEGIYENIRSLSRELALCELVLNSYVPKEYQSMINQ---YTH-----WNED-- 605
            |...|:| ..:|.:.:.:.:::.|:  ....|:.|.....|...|..:   .||     .|||  
  Rat   731 LIKAQEELKNKESDSLVQALKTSSK--VDTSLISNKSTGNETTEMPKKSRTQTHSERKRLNEDGL 793

  Fly   606 -IGE 608
             :||
  Rat   794 QLGE 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp64DNP_523934.1 KISc_KIF3 19..352 CDD:276822 115/460 (25%)
Smc <433..>578 CDD:440809 40/171 (23%)
Kif20bXP_006231343.1 KISc_KIF23_like 58..476 CDD:276819 113/427 (26%)
RBD_KIF20B 599..647 CDD:409644 12/51 (24%)
SMC_prok_B 675..1490 CDD:274008 28/125 (22%)

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