DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp64D and Kif3b

DIOPT Version :10

Sequence 1:NP_523934.1 Gene:Klp64D / 38611 FlyBaseID:FBgn0004380 Length:677 Species:Drosophila melanogaster
Sequence 2:NP_001099999.1 Gene:Kif3b / 296284 RGDID:1306815 Length:747 Species:Rattus norvegicus


Alignment Length:639 Identity:304/639 - (47%)
Similarity:424/639 - (66%) Gaps:44/639 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ENVRVVVRTRPMDKNELSAGALSAISVDKINRAITVMKPNATANEPPKTYYFDNVFDGGSNQMDL 83
            |:||||||.|||:..|.:|.....:.||.....::|..|..|::|.|||:.||.|:|..:.|.:|
  Rat     8 ESVRVVVRCRPMNGKEKAAAYDKVVDVDVKLGQVSVKNPKGTSHEMPKTFTFDAVYDWNAKQFEL 72

  Fly    84 YVDTARPIVDKVLEGYNGTILAYGQTGTGKTYTMSGNPDSPQTKGIIPNAFAHIFGHIAKAKENQ 148
            |.:|.||:||.||:|:||||.|||||||||||||.|....|:.:|:|||:|.|||.||::: :||
  Rat    73 YDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGVRGDPEKRGVIPNSFDHIFTHISRS-QNQ 136

  Fly   149 KFLVRVSYMEIYNEEVRDLLGKDVGKSLEVKERPDIGVFVKDLSGYVVHNADDLENIMRLGNKNR 213
            ::|||.||:|||.||:||||.||..|.||:|||||.||:|||||.:|..:..::|::|.:||:||
  Rat   137 QYLVRASYLEIYQEEIRDLLSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNR 201

  Fly   214 AVGATKMNQESSRSHAIFSITVERSELGEGDVQHVRMGKLQLVDLAGSERQSKTQASGQRLKEAT 278
            :||||.||:.||||||||.||||.||:|.....|:|:|||.||||||||||:||.|.|:||||||
  Rat   202 SVGATNMNEHSSRSHAIFVITVECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEAT 266

  Fly   279 KINLSLSVLGNVISALVDGKSTHIPYRNSKLTRLLQDSLGGNSKTVMCATISPADSNYMETISTL 343
            |||||||.|||||||||||||||||||:||||||||||||||:||||.|.:.||..|..||::||
  Rat   267 KINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTL 331

  Fly   344 RYASRAKNIQNRMHINEEPKDALLRHFQEEIARLRKQLEE---------------------GDSL 387
            |||:|||||:|:..:||:|||||||.||||||||:.|||:                     |:..
  Rat   332 RYANRAKNIKNKPRVNEDPKDALLREFQEEIARLKAQLEKRSIGRRKRREKRREGGGSGGGGEEE 396

  Fly   388 EEEPPSSEEEEDTADD---ELEAPLEIE----LESSTIQAVEKKPKKKREKTDAEKEELAKRKNE 445
            |||....|||.|..||   |.:..||||    :|..::.|             .||..|.|.|.:
  Rat   397 EEEGEEGEEEGDDKDDYWREQQEKLEIEKRAIVEDHSLVA-------------EEKMRLLKEKEK 448

  Fly   446 HQKEIEHAKTEQETLRNKLVSLEGKILVGGENLLEKAQTQELLLEQSIAELEQHEKSEEALKQTL 510
            ..:::...|...|.|..|:.::|.|:||||:|:::....|:.:|||...|:.:.::.|..::|.:
  Rat   449 KMEDLRREKDAAEMLGAKIKAMESKLLVGGKNIVDHTNEQQKILEQKRQEIAEQKRREREIQQQM 513

  Fly   511 QQKATERIDIEERYSTLQDASTGITKKIHRVMQMLMGVKSELADQQQEHQREKEGIYENIRSLSR 575
            :.:..|.::::|.|::||......|||:.::...|..||:|:.|.|:||.:|::.:.:....|:|
  Rat   514 ESRDEETLELKETYTSLQQEVDIKTKKLKKLFSKLQAVKAEIHDLQEEHIKERQELEQTQNELTR 578

  Fly   576 ELALCELVLNSYVPKEYQSMINQYTHWNEDIGEWQLKCVAYTGNN--MRKHISA 627
            ||.|..|::.:::|.|.::.|...:.::::...|:|..:....|.  |::.:||
  Rat   579 ELKLKHLIIENFIPLEEKNKIMNRSFFDDEEDHWKLHPITRLENQQMMKRPVSA 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp64DNP_523934.1 KISc_KIF3 19..352 CDD:276822 209/332 (63%)
Smc <433..>578 CDD:440809 43/144 (30%)
Kif3bNP_001099999.1 KISc_KIF3 8..340 CDD:276822 209/332 (63%)
Smc <355..>581 CDD:440809 73/238 (31%)

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