DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp64D and Kif1b

DIOPT Version :10

Sequence 1:NP_523934.1 Gene:Klp64D / 38611 FlyBaseID:FBgn0004380 Length:677 Species:Drosophila melanogaster
Sequence 2:XP_038965095.1 Gene:Kif1b / 117548 RGDID:621520 Length:1825 Species:Rattus norvegicus


Alignment Length:823 Identity:238/823 - (28%)
Similarity:353/823 - (42%) Gaps:224/823 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NVRVVVRTRPMDKNELSAGALSAISVDKINRAITVMKPNATA-------NEPPKTYYFDNVFDGG 77
            :|:|.||.||.:..|.|          |.::.|..|:.|:|:       .|.||::.||..:...
  Rat     5 SVKVAVRVRPFNSRETS----------KESKCIIQMQGNSTSIINPKNPKEAPKSFSFDYSYWSH 59

  Fly    78 SNQMD--------LYVDTARPIVDKVLEGYNGTILAYGQTGTGKTYTMSGNPDSPQTKGIIPNAF 134
            ::..|        :|.|..:.::....||||..|.||||||.||:|||.|..:..|. ||||...
  Rat    60 TSPEDPCFASQSRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGKQEESQA-GIIPQLC 123

  Fly   135 AHIFGHI-AKAKENQKFLVRVSYMEIYNEEVRDLLGKDVGKSLEVKERPDIGVFVKDLSGYVVHN 198
            ..:|..| ....|:..:.|.|||||||.|.|||||......:|.|:|.|.:|.:|:|||...|.:
  Rat   124 EELFEKINDNCNEDMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTS 188

  Fly   199 ADDLENIMRLGNKNRAVGATKMNQESSRSHAIFSIT-VERSELGEGDVQHVRMGKLQLVDLAGSE 262
            ..|:.::|..|||.|.|.||.||:.||||||:|:|. .::.:..|.::...::.|:.||||||||
  Rat   189 YTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKQDPETNLSTEKVSKISLVDLAGSE 253

  Fly   263 RQSKTQASGQRLKEATKINLSLSVLGNVISAL--VDG---------KSTHIPYRNSKLTRLLQDS 316
            |...|.|.|.||||...||.||:.||.|||||  ||.         |:..||||:|.||.||:::
  Rat   254 RADSTGAKGTRLKEGANINKSLTTLGKVISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLREN 318

  Fly   317 LGGNSKTVMCATISPADSNYMETISTLRYASRAKNIQNRMHINEEPKDALLRHFQEEIARLRKQL 381
            |||||:|.|.|.:||||.||.||:||||||.|||.|:....|||:|...|:|..:||:.||:..|
  Rat   319 LGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIKCNAVINEDPNAKLVRELKEEVTRLKDLL 383

  Fly   382 EE---GDSLEEEP---------------------------------------------------- 391
            ..   ||.::.:|                                                    
  Rat   384 RAQGLGDIIDIDPLMDDYSGSGGKYLKDFQNNKHRYLLASENQRPGNFSTASMGSLTSSPSSCSL 448

  Fly   392 -------------------PSSEE------EEDTADDELEAPLEIELESSTIQAVEKK------- 424
                               |..||      |.:....||....|.:|..:....:|::       
  Rat   449 NSQAGLTSVTSIQERIMSTPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRMEREALLAEMG 513

  Fly   425 --------------PKK--------------------------KREKTDAEKEELAKRKNEHQKE 449
                          |||                          :..:.|||:.:.......|.||
  Rat   514 VAIREDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGQADAERRQDIVLSGAHIKE 578

  Fly   450 IEHA--KTEQETLRNKLVSLE----GKILVGGENLLEKAQTQ---ELLL-----------EQSIA 494
             ||.  ::|:......:|:||    .:..|.|:.:....|.:   .:::           ||:.|
  Rat   579 -EHCIFRSERNNTGEVIVTLEPCERSETYVNGKRVAHPVQLRSGNRIIMGKNHVFRFNHPEQARA 642

  Fly   495 ELEQHEKSE---EALKQTLQQK---ATERIDI-EERYSTLQDASTGITKKIHRVMQMLMGVKSEL 552
            |.|:...:|   |.:..|..|:   ..:.||: :|....||:            |::|...:.|.
  Rat   643 EREKTPSAETPSEPVDWTFAQRELLEKQGIDMKQEMEKRLQE------------MEILYKREKEE 695

  Fly   553 ADQQQEHQREKEGIYEN-IRSLSRELALCELVLNSYVPKEYQSMINQYTHWNEDIGEWQLKCVAY 616
            ||...|.||..   ||: :::|.:::....|...:...:|.:..: .:|....::.:|.      
  Rat   696 ADLLLEQQRLD---YESKLQALQKQVETRSLAAETTEEEEEEEEV-PWTQHEFELAQWA------ 750

  Fly   617 TGNNMRKHISAHKTSGKEPDFLDLSHVYLSYNTDGVSNPMRSK 659
                .||..|...||.:  |.|..:.|||. ..:.:|..::.|
  Rat   751 ----FRKWKSHQFTSLR--DLLWGNAVYLK-EANAISVELKKK 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp64DNP_523934.1 KISc_KIF3 19..352 CDD:276822 155/359 (43%)
Smc <433..>578 CDD:440809 40/172 (23%)
Kif1bXP_038965095.1 KISc_KIF1A_KIF1B 4..361 CDD:276816 156/366 (43%)
Kinesin_assoc 358..555 CDD:465047 26/196 (13%)
FHA_KIF1B 530..639 CDD:438779 16/109 (15%)
GimC 662..>719 CDD:440992 17/71 (24%)
KIF1B 845..892 CDD:463574
KIF1B <956..975 CDD:463574
DUF3694 1266..1422 CDD:463599
PH_KIFIA_KIFIB 1710..1808 CDD:269939
Blue background indicates that the domain is not in the aligned region.

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