DRSC/TRiP Functional Genomics Resources

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Protein Alignment lama and Plbd2

DIOPT Version :9

Sequence 1:NP_001261440.1 Gene:lama / 38610 FlyBaseID:FBgn0016031 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_076114.2 Gene:Plbd2 / 71772 MGIID:1919022 Length:594 Species:Mus musculus


Alignment Length:699 Identity:173/699 - (24%)
Similarity:271/699 - (38%) Gaps:183/699 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TRIGTYILIGA--GLLVIGAFFIGYMERPEYDGTYCATALWTKQVGFQIENWKQQND-------- 66
            |.:.|..|:.:  |||:.|.                |.||.|...|     |::||.        
Mouse    24 TSLTTLALLASLTGLLLSGP----------------AGALPTLGPG-----WQRQNPDPPVSRTR 67

  Fly    67 --LVNIPTGVGRI---CYKDSV---------YENGWAQIEVETQRTYPDWVQAYAAGMLEGSLTW 117
              |::..:|..|:   .:.|:|         .|.|||.:::.|...|.|.:||||||::|.|::.
Mouse    68 SLLLDAASGQLRLEDGFHPDAVAWANLTNAIRETGWAYLDLSTNGRYNDSLQAYAAGVVEASVSE 132

  Fly   118 RNIYNQWSNTISSSCERDESTQKFCGWLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGL 182
            ..||..|.||:.:.|...|....:|..|::.|..|...::|:.|...:..||||:.|.:.||:||
Mouse   133 ELIYMHWMNTVVNYCGPFEYEVGYCEKLKNFLEANLEWMQREMELNPDSPYWHQVRLTLLQLKGL 197

  Fly   183 ETGYKRGASRARSDLEEEIPFS---------DFLLMNAAADIQDLKIYYENYELQNSTEHTEEPG 238
            |..|           |..:.|.         .|||:..:.|::||:      ...|.|......|
Mouse   198 EDSY-----------EGRLTFPTGRFTIKPLGFLLLQISGDLEDLE------PALNKTNTKPSLG 245

  Fly   239 TDQPKNFFLPSATMLTKIVQEEESPQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTV 303
            :.        |.:.|.|::     |....||..|:|..||.:||||.|:|:..:....:.....|
Mouse   246 SG--------SCSALIKLL-----PGGHDLLVAHNTWNSYQNMLRIIKKYRLQFREGPQEEYPLV 297

  Fly   304 PGVDITFTGYPGILGSTDDFYTIKGRHLHAIVGGVGIKNENLQLWKTVDPKKMVPLVARVMAANR 368
            .|.::.|:.|||.:.|.|||| |.|..|..:...:|  |:|..|||.|.|:..|....|.:.|||
Mouse   298 AGNNLVFSSYPGTIFSGDDFY-ILGSGLVTLETTIG--NKNPALWKYVQPQGCVLEWIRNVVANR 359

  Fly   369 ISQNRQTWASAMSR-HPFTGAKQWITVDLNKMKVQDNLYNVLEGDDKHDDAPVVLNEKDRTAIQQ 432
            ::.:..|||....| :..|...||:.||          |.....:.....:.|:.          
Mouse   360 LALDGATWADVFKRFNSGTYNNQWMIVD----------YKAFLPNGPSPGSRVLT---------- 404

  Fly   433 RHDQLRDMVWIAEQLPGMMTKKDVTQGFLVPGNTSWLANGVPYFKNVLELSGV-----------N 486
                      |.||:|||:...|.|....  ..|.|.:..:|||:.|...||:           :
Mouse   405 ----------ILEQIPGMVVVADKTAELY--KTTYWASYNIPYFETVFNASGLQALVAQYGDWFS 457

  Fly   487 YSEDQQLTV--ADEEELTSLASVDKYLRTHGFRGDLLGSQESIAYGNIDLKLFSYNARLGISDFH 549
            |:::.:..:  .|:..:..:.::.:.:|.:.|..|.|...|:     .:.|..:.||....||.:
Mouse   458 YTKNPRAKIFQRDQSLVEDMDAMVRLMRYNDFLHDPLSLCEA-----CNPKPNAENAISARSDLN 517

  Fly   550 AFAGPVFLRFQHTQPRTLEDEGQDGGVPPAASMGDERLSVSIEDADSLAEMELITERRSVRNDMR 614
            ...|....:..|.:..        ||:           .|.:........|.::.          
Mouse   518 PANGSYPFQALHQRAH--------GGI-----------DVKVTSFTLAKYMSMLA---------- 553

  Fly   615 AIAMRKIGSG-------PFKWSEMSPVEEGGGHEGHPDEWNFDKVSPKW 656
                   .||       ||:||: ||. ....|.|.||.|.|..:...|
Mouse   554 -------ASGPTWDQCPPFQWSK-SPF-HSMLHMGQPDLWMFSPIRVPW 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lamaNP_001261440.1 Phospholip_B 19..654 CDD:282734 170/688 (25%)
Plbd2NP_076114.2 Phospholip_B 86..589 CDD:282734 154/610 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 153 1.000 Domainoid score I4279
eggNOG 1 0.900 - - E1_KOG3774
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I4317
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54246
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002308
OrthoInspector 1 1.000 - - otm43329
orthoMCL 1 0.900 - - OOG6_101392
Panther 1 1.100 - - LDO PTHR12370
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2726
SonicParanoid 1 1.000 - - X4061
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

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