DRSC/TRiP Functional Genomics Resources

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Protein Alignment lama and plbd1a

DIOPT Version :9

Sequence 1:NP_001261440.1 Gene:lama / 38610 FlyBaseID:FBgn0016031 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001124263.1 Gene:plbd1a / 569736 ZFINID:ZDB-GENE-050411-22 Length:535 Species:Danio rerio


Alignment Length:681 Identity:152/681 - (22%)
Similarity:246/681 - (36%) Gaps:209/681 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LLVIGAFFIGYMERPE----YDGTYCATALWTKQVGFQIENWKQQNDLVNIPTGVGRICYKDSVY 84
            |.:||..|....::.:    :|.|:.:..|            ||.   |..|.|.....|.:.:.
Zfish     9 LFLIGFLFSSRSDKLKATVYWDATHKSAVL------------KQG---VLDPAGASYGYYDNVLL 58

  Fly    85 ENGWAQIEVET---QRTYPDWVQAYAAGMLEGSLTWRNIYNQWSN---TISSSCERDESTQKFCG 143
            ..||..:||..   ..|..|.:..:.||.|||.||...|::.::|   .|..|.:...:.::|..
Zfish    59 STGWGVLEVRAGYGDTTQTDDITMFTAGYLEGFLTAPQIFDHYTNMYPQIIQSPKTLIAVKRFMA 123

  Fly   144 ----WLRDLLTTNYHRLKRQTEKAENDHYWHQLHLFITQLEGLETGYKRGASRARSDLEEEIPFS 204
                |.|       .::||.|    .|..|....|.:.||:||:.|..:.|.:     ....|.|
Zfish   124 KQDEWSR-------LQVKRNT----TDPLWIHTGLILAQLDGLQAGVNQWAKQ-----HGRKPLS 172

  Fly   205 DFL--LMNAAADIQDLKIYYENYELQNSTEHTEEPGTDQPKNFFLPSATM-----LTKIVQEEES 262
            .|.  .:||..|:.||             .....|||...::.: |...|     |.|::     
Zfish   173 QFAAQFLNAVGDLLDL-------------IPALSPGTSTVRHRY-PDIPMGHCSALIKML----- 218

  Fly   263 PQVLQLLFGHSTAGSYSSMLRIQKRYKFHYHFSSKLRSNTVPGVDITFTGYPGILGSTDDFYTIK 327
            |....|||.||:..:|::.:||.|.:.|..     ...:|..| .::|:.|||.|.|.||||.: 
Zfish   219 PGFENLLFAHSSWYTYAATMRIYKHWDFRL-----TEPHTATG-KLSFSSYPGFLVSLDDFYLL- 276

  Fly   328 GRHLHAIVGGVGIKNE-------NLQLWKTVDPKKMVPLVARVMAANRISQNRQTWASAMSRH-P 384
                     |.|:...       |:.|:.:|.|..:... .||..||.:::....||:..||: .
Zfish   277 ---------GSGLMMTQTTNNVFNMSLFSSVTPASLFAW-QRVRLANTLARTGAQWANTFSRYNS 331

  Fly   385 FTGAKQWITVDLNKMKVQDNLYNVLEGDDKHDDAPVVLNEKDRTAIQQRHDQLRDMVWIAEQLPG 449
            .|...|::.||.:|:.:..::          ||..:.                     :.||:||
Zfish   332 GTYNNQYMIVDSSKVNLGVSV----------DDGALT---------------------VVEQIPG 365

  Fly   450 MMTKKDVTQ----GFLVPGNTSWLANGVPYFKNVLELSGVN-----YSED--------QQLTVAD 497
            ::...|.||    |:       |.:..||:.:.:.||||.:     |.||        .::...|
Zfish   366 LVEFSDQTQTLRRGY-------WPSYNVPFHRRIYELSGYDEMWRKYGEDFSYDLCPRAKIFRRD 423

  Fly   498 EEELTSLASVDKYLRTHGFRGDLLGSQE---SIAYGNIDLKLFSYNARLGISDFHAFAGPVFLRF 559
            :..:|.::|:...:|.:.::.|.....:   ||...| ||                         
Zfish   424 QSAVTDMSSLKHIMRYNEYKSDPYSQGDPCKSICCRN-DL------------------------- 462

  Fly   560 QHTQPRTLEDEGQDGGVPPAASMGDERLSVSIEDADSLAEMELITERRSVRNDMRAIAMRKIGSG 624
                   ||.....||... ..:.|.||:...       ..|.|....:...|:.|         
Zfish   463 -------LEHGASPGGCYD-TKVTDVRLARGF-------MAEAINGPTTAGGDLPA--------- 503

  Fly   625 PFKWSEMSPVEEGGGHEGHPDEWNFDKVSPK 655
             |.|::.:...    |.|.|:.:||..|..|
Zfish   504 -FSWTDFNSTT----HTGLPERYNFSFVHMK 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lamaNP_001261440.1 Phospholip_B 19..654 CDD:282734 151/678 (22%)
plbd1aNP_001124263.1 Phospholip_B 4..528 CDD:282734 151/678 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594642
Domainoid 1 1.000 174 1.000 Domainoid score I3618
eggNOG 1 0.900 - - E1_KOG3774
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 174 1.000 Inparanoid score I4062
OMA 1 1.010 - - QHG54246
OrthoDB 1 1.010 - - D167631at33208
OrthoFinder 1 1.000 - - FOG0002308
OrthoInspector 1 1.000 - - otm25492
orthoMCL 1 0.900 - - OOG6_101392
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2726
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.700

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