Sequence 1: | NP_001246636.1 | Gene: | shep / 38605 | FlyBaseID: | FBgn0052423 | Length: | 590 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_011092.1 | Gene: | PAB1 / 856912 | SGDID: | S000000967 | Length: | 577 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 506 | Identity: | 112/506 - (22%) |
---|---|---|---|
Similarity: | 166/506 - (32%) | Gaps: | 180/506 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 188 AASPSNTNSSSSSNTGSQSGTLSTSLSNT--------------------TNTNTNMGPNGTVQNQ 232
Fly 233 NQQGG---EQLSKT------------------------NLYIRGLQQGTTDKDLVNMCAQYGTII 270
Fly 271 STKAILDKTTNKCKGYGFVDFEQPAFAECAVKGLQG---KGVQAQMA---KQQEQDP-------- 321
Fly 322 -TNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGN 385
Fly 386 TIPGAKDPLLVKFADGGPKKK-------------------------NLF-KTPDPNARAWRDVSA 424
Fly 425 EGIPVAYDP---------TMQQNGVSVNVGTPIGVPYSRFSAPQ-------------VGGYP--- 464
Fly 465 -------VAGSQWIPGYMMTQVDDQTSYSPQYMQMAAA-----------------PPLGVTSYKP 505
Fly 506 EAVNQVQPRGISMMVSGDTGVPYGTMMPQLATLQIGNSYISPTYPYYAPPP 556 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shep | NP_001246636.1 | RRM1_MSSP | 243..313 | CDD:240689 | 24/96 (25%) |
RRM2_MSSP | 322..400 | CDD:240690 | 21/77 (27%) | ||
PAB1 | NP_011092.1 | PABP-1234 | 38..559 | CDD:130689 | 107/492 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |