DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment shep and AT2G47310

DIOPT Version :9

Sequence 1:	NP_001246636.1	Gene:	shep / 38605	FlyBaseID:	FBgn0052423	Length:	590	Species:	Drosophila melanogaster
Sequence 2:	NP_850472.1	Gene:	AT2G47310 / 819344	AraportID:	AT2G47310	Length:	512	Species:	Arabidopsis thaliana

Alignment Length:	320	Identity:	74/320 - (23%)
Similarity:	118/320 - (36%)	Gaps:	70/320 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   146 APLPQPAY-AAYT--PHTATTPATTTVSFLSQPVDYYWYGQRVPTAASPSNTNSSSSSNTGSQSG 207
            ||.|.|.| ..|.  ||....|.......:: .|.::.|         |.|.|.....|....||
plant    12 APPPVPYYHNNYNNPPHHQIHPPPPPHHHIA-AVGFHKY---------PQNDNRDQRFNQPHYSG 66

  Fly   208 TLSTSLSNTTNTNTNMGPNGTVQNQNQQGGEQLSK--------------TNLYIRGLQQGTTDKD 258
            .....:.:.:|......|      .:..||..|.|              ..||:..:.:..|:.|
plant    67 QQQNMIVDQSNNAPPPFP------PSPCGGSSLRKRRSQSATDNADGSIAKLYVAPISKTATEYD 125

  Fly   259 LVNMCAQYGTIISTKAIL--DKTTNKCKGYGFVDFEQPAFAECAVKGLQGK--------GVQAQM 313
            :..:..:||.:  |:.||  ||.|.:...|.|:.:::......|:..|..:        .|:.:.
plant   126 IRQVFEKYGNV--TEIILPKDKMTGERAAYCFIKYKKVEEGNAAIAALTEQFTFPGEMLPVKVRF 188

  Fly   314 AKQQEQ----------DPTNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFAR 368
            |:.:.:          |...||:..|.....:.::..:.|:||.:....:..|.....:|..|.:
plant   189 AEAERERIGFAPVQLPDNPKLYVRCLNKQTTKMEVNEVFSRYGIIEDIYMALDDMKICRGYAFVQ 253

  Fly   369 MESREKCEQIIQMFNG-NTIPGAKDPLLVKFADGGPKKKNL------FKTP------DPN 415
            ...:|.....|:..|| .||.|:..||:|:|||  |||..|      |.||      |||
plant   254 FSCKEMALAAIKALNGLFTIRGSDQPLIVRFAD--PKKPRLGEQRSTFNTPPAMQHFDPN 311

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
shep	NP_001246636.1	RRM1_MSSP	243..313	CDD:240689	17/79 (22%)
shep	NP_001246636.1	RRM2_MSSP	322..400	CDD:240690	20/78 (26%)
AT2G47310	NP_850472.1	RRM_SF	111..190	CDD:418427	17/80 (21%)
		RRM_SF	208..287	CDD:418427	22/80 (28%)
		WW	406..432	CDD:395320
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910