Sequence 1: | NP_001246636.1 | Gene: | shep / 38605 | FlyBaseID: | FBgn0052423 | Length: | 590 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005158285.1 | Gene: | rbms3 / 767747 | ZFINID: | ZDB-GENE-060929-244 | Length: | 415 | Species: | Danio rerio |
Alignment Length: | 475 | Identity: | 182/475 - (38%) |
---|---|---|---|
Similarity: | 226/475 - (47%) | Gaps: | 118/475 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 138 QQAAYRYTAPLPQPAYAAYTPHTATTPATTTVSFLSQPVDYYWYGQRVPTAASPS-NTNSSSSSN 201
Fly 202 TGSQSGTLSTSLSNTTNTNTNMGPNGTVQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQY 266
Fly 267 GTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVKGLQGKGVQAQMAKQQEQDPTNLYIANLPP 331
Fly 332 HFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGN------TIPGA 390
Fly 391 KDPLLVKFADGGPKKKNLFKTPDPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPIGVPYSRF 455
Fly 456 SAPQVGGYPVAGSQWIPGYMMTQVDDQTSYSPQYMQMAAAPPLGV-----TSYKPEAVNQVQPRG 515
Fly 516 ISMMVSGDTGV---PYGTMMP---QLATLQIG--NSYI----SPTYPYYAPPPTIIPTMP----- 563
Fly 564 -MTDSEQASTAASPDEAYTQ 582 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shep | NP_001246636.1 | RRM1_MSSP | 243..313 | CDD:240689 | 47/69 (68%) |
RRM2_MSSP | 322..400 | CDD:240690 | 46/83 (55%) | ||
rbms3 | XP_005158285.1 | RRM1_RBMS3 | 52..131 | CDD:240916 | 56/78 (72%) |
RRM2_MSSP2 | 135..220 | CDD:240918 | 47/84 (56%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 94 | 1.000 | Domainoid score | I7401 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 274 | 1.000 | Inparanoid score | I2939 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001320 | |
OrthoInspector | 1 | 1.000 | - | - | otm24925 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24012 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3067 |
SonicParanoid | 1 | 1.000 | - | - | X530 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
9 | 9.090 |