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Protein Alignment shep and elavl1
DIOPT Version :9
Sequence 1: | NP_001246636.1 |
Gene: | shep / 38605 |
FlyBaseID: | FBgn0052423 |
Length: | 590 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001005461.1 |
Gene: | elavl1 / 448062 |
XenbaseID: | XB-GENE-481800 |
Length: | 326 |
Species: | Xenopus tropicalis |
Alignment Length: | 191 |
Identity: | 62/191 - (32%) |
Similarity: | 100/191 - (52%) |
Gaps: | 8/191 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 226 NGTVQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVD 290
||...:.:....:.:.:|||.:..|.|..|..:|.::.:..|.:.|.|.|.||......|||||:
Frog 3 NGYGDHMDDVCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVN 67
Fly 291 FEQPAFAECAVKGLQGKGVQAQMAKQQEQDPT-------NLYIANLPPHFKETDLEAMLSKYGQV 348
:.....||.|:..|.|..:|::..|.....|: ||||:.||....:.|:|.|...:|::
Frog 68 YLNAKDAERAINTLNGLRLQSKTIKVSVARPSSESIKDANLYISGLPRTMTQKDVEDMFLPFGRI 132
Fly 349 VSTRILRDQQMN-SKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKKNL 408
:::|:|.||... |:||.|.|.:.|.:.|:.|..|||:..||:.:|:.||||....:.||:
Frog 133 INSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFAANPNQNKNM 193
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D614259at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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