| Sequence 1: | NP_001246636.1 | Gene: | shep / 38605 | FlyBaseID: | FBgn0052423 | Length: | 590 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_651755.2 | Gene: | CG7903 / 43554 | FlyBaseID: | FBgn0039730 | Length: | 384 | Species: | Drosophila melanogaster |
| Alignment Length: | 144 | Identity: | 31/144 - (21%) |
|---|---|---|---|
| Similarity: | 51/144 - (35%) | Gaps: | 30/144 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 324 LYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIP 388
Fly 389 GAKDPLLV-----KFADGGPKKKNLFKTPDPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPI 448
Fly 449 GVPYSRFSAPQVGG 462 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| shep | NP_001246636.1 | RRM_SF | 240..321 | CDD:473069 | |
| RRM2_MSSP | 322..400 | CDD:409690 | 20/80 (25%) | ||
| CG7903 | NP_651755.2 | RRM_SF | 6..70 | CDD:473069 | 18/72 (25%) |
| PABP-1234 | <18..173 | CDD:130689 | 28/132 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||