Protein Alignment shep and maca

DIOPT Version :10

• Sequence 1: NP_001246636.1
• Gene: shep / 38605
• FlyBaseID: FBgn0052423
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_650473.1
• Gene: maca / 41892
• FlyBaseID: FBgn0038345
• Length: 251
• Species: Drosophila melanogaster
• Alignment Length: 198
• Identity: 59/198 - (29%)
• Similarity: 88/198 - (44%)
• Gaps: 19/198 - (9%)

  Fly   242 KTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAECAVKGL-- 304
            ||||.:..|.|..|:.:|..:.:::|.|...|.|..:.|.....|||||:.....|..||.|:
  Fly    40 KTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAVNGMDG 104

  Fly   305 ---QGKGVQAQMAKQQEQDPT--NLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMN-SKG 363
               :||.::...|:..|.:.|  :||:.|||.:..|..:..:.:.||.:|...:||.:..| |:|
  Fly   105 YETRGKRLKVAFARPSEYESTSSSLYVGNLPTYMDEKKVRELFATYGNIVDVNLLRHKFNNRSRG 169

  Fly   364 VGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFAD-----------GGPKKKNLFKTPDPNAR 417
            |.|.:.|.....|......:...|.||..||.|||.:           |...|.....:|.|..|
  Fly   170 VAFLQFELVRDAEVAKYGMDRYMIEGASRPLTVKFVEREKKGSSSTSSGSQYKDKRKSSPPPYKR 234

  Fly   418 AWR 420
            ..|
  Fly   235 RER 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
shep	NP_001246636.1	RRM_SF	240..321	CDD:473069	26/83 (31%)
		RRM2_MSSP	322..400	CDD:409690	27/80 (34%)
maca	NP_650473.1	sex-lethal	<41..>210	CDD:273740	52/168 (31%)