Protein Alignment shep and pabpc1b

DIOPT Version :9

• Sequence 1: NP_001246636.1
• Gene: shep / 38605
• FlyBaseID: FBgn0052423
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_957176.1
• Gene: pabpc1b / 393856
• ZFINID: ZDB-GENE-050308-1
• Length: 634
• Species: Danio rerio
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
shep	NP_001246636.1	RRM1_MSSP	243..313	CDD:240689
		RRM2_MSSP	322..400	CDD:240690
pabpc1b	NP_957176.1	PABP-1234	11..613	CDD:130689
		RRM1_I_PABPs	12..91	CDD:240824
		RRM2_I_PABPs	97..172	CDD:240825
		RRM3_I_PABPs	190..269	CDD:240826
		RRM4_I_PABPs	293..370	CDD:240827
		PABP	545..612	CDD:279051

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910