Sequence 1: | NP_001246636.1 | Gene: | shep / 38605 | FlyBaseID: | FBgn0052423 | Length: | 590 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163280.1 | Gene: | TBPH / 37781 | FlyBaseID: | FBgn0025790 | Length: | 531 | Species: | Drosophila melanogaster |
Alignment Length: | 374 | Identity: | 76/374 - (20%) |
---|---|---|---|
Similarity: | 122/374 - (32%) | Gaps: | 91/374 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 215 NTTNTNTNMGPNGTVQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKT 279
Fly 280 TNKCKGYGFV-----DFEQPAFAE--------CAVKGLQGKGVQAQMAKQQEQDPTNLYIANLPP 331
Fly 332 HFKETDLEAMLSKYGQVVSTRILRDQQMNS--------------------KGVGFARMESREKCE 376
Fly 377 ----QIIQMFNGNTIPGAKDPLLVKFADGGPKKKNLFKTPDPNA--RAWRDVSAEGIPVAYDPTM 435
Fly 436 QQNGVSVNVGTP-IGVPYSRFSAPQVGGYPVAGSQWIPGYMMTQVDDQTSYSPQYMQMAAAPPLG 499
Fly 500 VTSYKPEAVNQVQPRGISMMVSGDTGVPYGTM------MPQLATLQIGN 542 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shep | NP_001246636.1 | RRM1_MSSP | 243..313 | CDD:240689 | 21/82 (26%) |
RRM2_MSSP | 322..400 | CDD:240690 | 19/101 (19%) | ||
TBPH | NP_001163280.1 | RRM1_TDP43 | 108..184 | CDD:240767 | 18/75 (24%) |
RRM2_TDP43 | 192..261 | CDD:240768 | 12/68 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45439593 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |