Sequence 1: | NP_001246636.1 | Gene: | shep / 38605 | FlyBaseID: | FBgn0052423 | Length: | 590 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476667.1 | Gene: | pAbp / 37070 | FlyBaseID: | FBgn0265297 | Length: | 634 | Species: | Drosophila melanogaster |
Alignment Length: | 543 | Identity: | 120/543 - (22%) |
---|---|---|---|
Similarity: | 184/543 - (33%) | Gaps: | 137/543 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 152 AYAAYTPHTATTPATTTVSF---LSQPVDYYWYGQRVP--------------------------T 187
Fly 188 AASPSNTNSS--SSSNTGSQSGTLSTSLSNTTNTNTNMGP-NGTVQN--------------QNQQ 235
Fly 236 GGEQLSK-TNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAEC 299
Fly 300 AVKGLQGKGV---------QAQMAKQQEQD-----------------PTNLYIANLPPHFKETDL 338
Fly 339 EAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFAD--- 400
Fly 401 --------------GGPKKKNLFKTPDPNARAWRDVSAEGIPVAYDPTMQQN----GVSVNV--- 444
Fly 445 GTPIGVPYSR----FSAPQVGGYPVAGSQWIPGYMMTQVDDQTSYSPQYMQMAAAPPLGVTSYKP 505
Fly 506 EAVNQVQPRGISMMVSGDTGVPYGTMMPQLATLQIGNSYISPTYPYYA-----PPPTIIPTMPMT 565
Fly 566 DSEQASTA----------ASPDE 578 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shep | NP_001246636.1 | RRM1_MSSP | 243..313 | CDD:240689 | 27/78 (35%) |
RRM2_MSSP | 322..400 | CDD:240690 | 23/77 (30%) | ||
pAbp | NP_476667.1 | PABP-1234 | 2..625 | CDD:130689 | 120/543 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45439589 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24012 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |