Sequence 1: | NP_001246636.1 | Gene: | shep / 38605 | FlyBaseID: | FBgn0052423 | Length: | 590 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245447.1 | Gene: | elav / 31000 | FlyBaseID: | FBgn0260400 | Length: | 483 | Species: | Drosophila melanogaster |
Alignment Length: | 515 | Identity: | 130/515 - (25%) |
---|---|---|---|
Similarity: | 208/515 - (40%) | Gaps: | 147/515 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 GGGGGVSMRGPSNAQQLPPQIPRSQNYSNGSSSSAAAAPLTSRSAFP--GAPLTASAVAL----- 85
Fly 86 KGALPQRPPAMTSPAAAAAGAALAAGAPYRGAASWTPQGYAPAAAAAAAAVAQQAAYRYTAPLPQ 150
Fly 151 PAYAAYTPHTATTPATTTVSFLSQPVDYYWYGQRVPTAASPSNTNSSSSSNTGSQSGTLSTSLSN 215
Fly 216 TTNTNTNMGPNGTVQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDK-- 278
Fly 279 -----------TTNKCKGYGFVDFEQPAFAECAVKGLQGKGVQAQMAKQQEQDPT-------NLY 325
Fly 326 IANLPPHFKETDLEAMLSKYGQVVSTRILRD--QQMNSKGVGFARMESREKCEQIIQMFNGNTIP 388
Fly 389 GAKDPLLVKFADGGPKKKNLFKTPDPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPIGVPYS 453
Fly 454 RFSAPQVGGYPVAGSQ---WIPGYMMTQVDDQTSYSPQYMQMAAAP----PLGVTSYKPE 506 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shep | NP_001246636.1 | RRM1_MSSP | 243..313 | CDD:240689 | 26/82 (32%) |
RRM2_MSSP | 322..400 | CDD:240690 | 29/86 (34%) | ||
elav | NP_001245447.1 | ELAV_HUD_SF | 146..483 | CDD:273741 | 76/306 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D614259at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |