Sequence 1: | NP_001246636.1 | Gene: | shep / 38605 | FlyBaseID: | FBgn0052423 | Length: | 590 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001003793.1 | Gene: | RBMS3 / 27303 | HGNCID: | 13427 | Length: | 437 | Species: | Homo sapiens |
Alignment Length: | 505 | Identity: | 186/505 - (36%) |
---|---|---|---|
Similarity: | 231/505 - (45%) | Gaps: | 139/505 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 143 RYTAPLPQPAYAAYTPHTATTPATTTVSFLSQPVDYYWYGQRVPTAASPSNTNSSSSSNTGSQSG 207
Fly 208 TLSTSLSNTTNTNTNMGPNGTVQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIIST 272
Fly 273 KAILDKTTNKCKGYGFVDFEQPAFAECAVKGLQGKGVQAQMAKQQEQDPTNLYIANLPPHFKETD 337
Fly 338 LEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGN------TIPGAKDPLLV 396
Fly 397 KFADGGPKKKNLFKTPDPNARAWRDVSAEGIPVAYDPTMQ-QNGVSVNVGTPIGVPYSRFSAPQV 460
Fly 461 GGYPVAGSQWIPGYMMTQVDDQTSYSPQYMQMAAAPPLGV-----TSYKPEAVNQVQPRGISMMV 520
Fly 521 SGDTGV---PYGTMMP---QLATLQIGNS------------------YISP------TY-PYYAP 554
Fly 555 ----------------PPTIIPTMPMTDSEQASTAA------SPDEAYTQ 582 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shep | NP_001246636.1 | RRM1_MSSP | 243..313 | CDD:240689 | 47/69 (68%) |
RRM2_MSSP | 322..400 | CDD:240690 | 48/83 (58%) | ||
RBMS3 | NP_001003793.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 28..57 | 10/57 (18%) | |
RRM1_RBMS3 | 57..136 | CDD:409902 | 56/78 (72%) | ||
RRM2_RBMS3 | 139..226 | CDD:240919 | 51/86 (59%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 399..437 | 9/36 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 95 | 1.000 | Domainoid score | I7413 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4733 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 257 | 1.000 | Inparanoid score | I3155 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001320 | |
OrthoInspector | 1 | 1.000 | - | - | otm41903 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24012 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X530 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.920 |