Sequence 1: | NP_001246636.1 | Gene: | shep / 38605 | FlyBaseID: | FBgn0052423 | Length: | 590 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_024307178.1 | Gene: | ELAVL3 / 1995 | HGNCID: | 3314 | Length: | 424 | Species: | Homo sapiens |
Alignment Length: | 337 | Identity: | 81/337 - (24%) |
---|---|---|---|
Similarity: | 130/337 - (38%) | Gaps: | 109/337 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 225 PNGTVQNQNQQGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFV 289
Fly 290 DFEQPAFAECAVKGLQGKGVQAQMAKQQEQDPT-------NLYIANLPPHFKETDLEAMLSKYGQ 347
Fly 348 VVSTRILRDQQMN---------------------------------------------------- 360
Fly 361 ------SKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFKTP 412
Fly 413 DPNARAWRDVSAEGIPVAYDPTMQQN---------GVSVNVGTPIGVPYSRFSAPQVGGYP---- 464
Fly 465 ------VAGSQW 470 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shep | NP_001246636.1 | RRM1_MSSP | 243..313 | CDD:240689 | 24/69 (35%) |
RRM2_MSSP | 322..400 | CDD:240690 | 31/142 (22%) | ||
ELAVL3 | XP_024307178.1 | RRM | 36..423 | CDD:330708 | 76/322 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D614259at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |