DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4603 and Yod1

DIOPT Version :9

Sequence 1:NP_001261435.1 Gene:CG4603 / 38603 FlyBaseID:FBgn0035593 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_848806.2 Gene:Yod1 / 226418 MGIID:2442596 Length:343 Species:Mus musculus


Alignment Length:348 Identity:145/348 - (41%)
Similarity:196/348 - (56%) Gaps:55/348 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VKLKSKKGQFIVNDLNEHTTLGELKTKIVQATDIEATQLHVLVGYPPKPLDLSQQQEQRALKAVG 71
            |:.|:|.|..::..|:..|.|.||:.:|...|.|......:||||||:.||||.:  ...|..:.
Mouse    44 VRCKAKGGTHLLQGLSSRTRLRELQGQIAAITGIAPGSQRILVGYPPECLDLSDR--DITLGDLP 106

  Fly    72 INSGETLIVEE-----KAAPAPAAPVPGGTTVEDDEALARRLQAEEEAQLLQETAGGPVAQAADY 131
            |.||:.|||||     ||:||                                        .:.|
Mouse   107 IQSGDMLIVEEDQTRPKASPA----------------------------------------FSKY 131

  Fly   132 QLPVAPTESGPNGDFNGILLKKVVPADNSCLFTSIRFVLNGKVDNEG-SEMMRHIIAQEVAADPQ 195
            ..|....|:.|      :|.:..|||||||||||:.:|:.|.|.|.. :..||.:|||.||:||.
Mouse   132 GAPSYVREALP------VLTRTAVPADNSCLFTSVYYVVEGGVLNPACAPEMRRLIAQIVASDPV 190

  Fly   196 SYNDAVLGKSNAEYCAWIQKADSWGGAIEVSILSNYYGIEIDVVDIQNAIINRFGEDKNFGLRVF 260
            .|::|:|||:|.:||.||::.|:||||||:||||.:|..||.|||.|...|:|||||..:..||.
Mouse   191 LYSEAILGKTNEDYCDWIRRDDTWGGAIEISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVL 255

  Fly   261 LLFDGIHYDPLYME-TSPSAAPATIFPVEELGVYQQAEQLANEAQSSRQYTNVDKFTLRCMQCDV 324
            |::||||||||... ..|...|.|||...:..|..||.:||:||:..||:|:|::||||||.|..
Mouse   256 LIYDGIHYDPLQRNFPDPDTPPLTIFSSNDDIVLVQALELADEARRKRQFTDVNRFTLRCMICQK 320

  Fly   325 RLVGQVQAQEHAKQTGHKNFGEI 347
            .|.||.:|::||::|||.||||:
Mouse   321 GLTGQAEARDHARETGHTNFGEV 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4603NP_001261435.1 UBQ 5..80 CDD:214563 27/72 (38%)
UBQ 10..80 CDD:294102 26/69 (38%)
COG5539 <158..346 CDD:227826 100/189 (53%)
Yod1NP_848806.2 UBQ 41..>84 CDD:294102 12/39 (31%)
UBX-like 45..123 30/79 (38%)
COG5539 72..342 CDD:227826 133/317 (42%)
Cys-loop. /evidence=ECO:0000250|UniProtKB:Q5VVQ6 149..155 5/5 (100%)
OTU 150..265 CDD:303090 65/114 (57%)
Variable-loop. /evidence=ECO:0000250|UniProtKB:Q5VVQ6 208..218 5/9 (56%)
His-loop. /evidence=ECO:0000250|UniProtKB:Q5VVQ6 258..262 2/3 (67%)
S2 site. /evidence=ECO:0000250|UniProtKB:Q5VVQ6 286..291 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836788
Domainoid 1 1.000 103 1.000 Domainoid score I6796
eggNOG 1 0.900 - - E1_COG5539
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13176
Inparanoid 1 1.050 242 1.000 Inparanoid score I3314
Isobase 1 0.950 - 0.811278 Normalized mean entropy S2422
OMA 1 1.010 - - QHG53653
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005589
OrthoInspector 1 1.000 - - oto95139
orthoMCL 1 0.900 - - OOG6_102949
Panther 1 1.100 - - LDO PTHR13312
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R880
SonicParanoid 1 1.000 - - X3996
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.740

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