DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and PTAC2

DIOPT Version :10

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_177623.1 Gene:PTAC2 / 843824 AraportID:AT1G74850 Length:862 Species:Arabidopsis thaliana


Alignment Length:517 Identity:111/517 - (21%)
Similarity:199/517 - (38%) Gaps:129/517 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 EEFLSNSTRRSKKLKAVEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAK 196
            :|..|....||    ...|...|..:.:..|...::.:|::  :|.::..|....||.:|:.||:
plant   165 DEMPSQGVSRS----VFSYTALINAYGRNGRYETSLELLDR--MKNEKISPSILTYNTVINACAR 223

  Fly   197 AGYTRKAFF-LYTKMRQRGLQVTGGTYTSLFNACA------NAPSV----SDG------------ 238
            .|...:... |:.:||..|:|....||.:|.:|||      .|..|    :||            
plant   224 GGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHL 288

  Fly   239 ---------LAKAQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNAD 294
                     |.|...|...|...|..|::.:||.:::||.:.|.:..|..:..:|.......||:
plant   289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353

  Fly   295 TFNFL-----------------LQACASNS---------------EHG-FRHALLTWHNMLQRGI 326
            |::.|                 |:..:||:               |.| |:..:..:|:|::..|
plant   354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418

  Fly   327 SPDYYSFNAMLRCARDCGFGDL-DSMREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLP 390
            .||..::..::..   ||.|.| :..|:::..:..:               |.:||.:|.|..:.
plant   419 EPDMETYEGIIFA---CGKGGLHEDARKILQYMTAN---------------DIVPSSKAYTGVIE 465

  Fly   391 AQIEVATTASELELPNLLLPQPHLGSLVALEEVTRPHERFLLL----GGLT----GFLEHMKQHN 447
            |..:.|.....|...|.:   ..:||..::|..   |.  ||.    |||.    ..|..:....
plant   466 AFGQAALYEEALVAFNTM---HEVGSNPSIETF---HS--LLYSFARGGLVKESEAILSRLVDSG 522

  Fly   448 ITPDIETFTAMLEVIPPTNAAEKQLLTFVRKIGLKADID-----------FFNILIKKRSMRFDY 501
            |..:.:||.|.:|........|:.:.|:|.....:.|.|           .|..|:.:...:|:.
plant   523 IPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEE 587

  Fly   502 ESAKEVLLMIRTAGLRPDIVTY-GVLALGCRTQ--EEARELLEQMHVAGIKMNMPILGAMLR 560
            ..|.::|         |.|:.| .:||:..:|:  ::..||||:|....:.....::|.|::
plant   588 MKASDIL---------PSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIK 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PLN03218 <166..>561 CDD:215636 104/483 (22%)
PPR repeat 186..213 CDD:276811 9/27 (33%)
PPR repeat 219..252 CDD:276811 14/63 (22%)
PPR repeat 258..287 CDD:276811 7/28 (25%)
PPR repeat 293..324 CDD:276811 11/63 (17%)
PPR repeat 330..357 CDD:276811 5/27 (19%)
PPR repeat 485..514 CDD:276811 6/39 (15%)
PPR repeat 552..576 CDD:276811 2/9 (22%)
PTAC2NP_177623.1 PLN03218 <138..>493 CDD:215636 75/354 (21%)
PPR repeat 143..170 CDD:276811 1/4 (25%)
PPR repeat 176..205 CDD:276811 5/30 (17%)
PPR repeat 211..239 CDD:276811 7/27 (26%)
PPR repeat 247..276 CDD:276811 8/28 (29%)
PPR repeat 284..311 CDD:276811 4/26 (15%)
PPR repeat 319..346 CDD:276811 7/26 (27%)
PPR repeat 352..381 CDD:276811 4/28 (14%)
PPR repeat 387..416 CDD:276811 5/28 (18%)
PPR repeat 422..448 CDD:276811 5/28 (18%)
PPR repeat 457..485 CDD:276811 6/30 (20%)
LapB 473..697 CDD:442196 40/185 (22%)
PPR repeat 492..521 CDD:276811 8/33 (24%)
PPR repeat 529..556 CDD:276811 7/26 (27%)
PPR repeat 562..591 CDD:276811 3/28 (11%)
PPR repeat 597..626 CDD:276811 10/28 (36%)
PPR repeat 668..693 CDD:276811
SMR 710..796 CDD:214676
Blue background indicates that the domain is not in the aligned region.

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