DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and AT1G74580

DIOPT Version :9

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_001322154.1 Gene:AT1G74580 / 843798 AraportID:AT1G74580 Length:763 Species:Arabidopsis thaliana


Alignment Length:514 Identity:125/514 - (24%)
Similarity:197/514 - (38%) Gaps:93/514 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 GDVEE-EEFLSNSTRRSKKLKAVEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLL 190
            |||:| |:.|....:|........|...|:...:...|:.|:.::  ..|.|...|||...||.|
plant   230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV--GCLIEQGPKPDVITYNNL 292

  Fly   191 ISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSL---------------------FNACA---- 230
            |.|..|....::|.....||...||:....||.:|                     ||...    
plant   293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357

  Fly   231 NAPSVSDGLA------KAQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQL 289
            ...|:.|||.      :|..|....|.||.:|||..||.:||.....|.:..|..||:||.|:.|
plant   358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422

  Fly   290 ELNADTFNFLL-----QACASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLRCARDCGFG--- 346
            .....|||.|:     ..|.|::: |....      |:.:|..||.::||.::.     |:.   
plant   423 IPEVQTFNILVNGLCKMGCVSDAD-GLVKV------MISKGYFPDIFTFNILIH-----GYSTQL 475

  Fly   347 DLDSMREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEA------NTTTLPAQIEVATTASELE-L 404
            .:::..|::|            :.|:.|...|:.:..:      .|:.....:|...|..|.. .
plant   476 KMENALEILD------------VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528

  Fly   405 PNLLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEVIPPTNAAE 469
            |||......|.||.          |:..|....|.||.||..::.||..||..:::.. ..|...
plant   529 PNLFTFNILLESLC----------RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF-CKNGDL 582

  Fly   470 KQLLTFVRKI----GLKADIDFFNILIKKRSMRFDYESAKEVLLMIRTAGLRPDIVTYGVLALG- 529
            ....|..||:    .:.:....:||:|...:.:.:...|:::...:....|.||..||.::..| 
plant   583 DGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647

  Fly   530 CRTQE---EARELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVNEIIQLSLEEGLKP 585
            |:|..   ..:.|||.|. .|...::..||.::...|..........||...:::||.|
plant   648 CKTGNVNLGYKFLLEMME-NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PPR_2 <157..196 CDD:289786 12/38 (32%)
PPR_2 182..231 CDD:289786 18/73 (25%)
PPR 185..215 CDD:279828 9/29 (31%)
PPR repeat 186..213 CDD:276811 9/26 (35%)
PPR repeat 219..252 CDD:276811 12/63 (19%)
PPR_1 252..284 CDD:289614 13/31 (42%)
PPR_2 256..304 CDD:289786 19/52 (37%)
PPR repeat 258..287 CDD:276811 11/28 (39%)
PPR repeat 293..324 CDD:276811 8/35 (23%)
PPR repeat 330..357 CDD:276811 4/29 (14%)
PPR repeat 485..514 CDD:276811 4/28 (14%)
PPR repeat 552..576 CDD:276811 4/23 (17%)
AT1G74580NP_001322154.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 104 1.000 Inparanoid score I2129
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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