DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT1G71210

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_177277.2	Gene:	AT1G71210 / 843461	AraportID:	AT1G71210	Length:	879	Species:	Arabidopsis thaliana

Alignment Length:	819	Identity:	154/819 - (18%)
Similarity:	268/819 - (32%)	Gaps:	274/819 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 RSMSCHIRGLQLNATGR-RLNSYNISRLVILPA----TWSCSQNRLLHVRIT------------- 54
            |:...|:..|:|..|.: .|:..:.:|..||..    .|:..|....|.|.|
plant    97 RAFYLHLSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGFHHTRATFHAIFKILRGAKL 161

  Fly    55 --------DQQAGLETKREANRNQNPFREEVFEELITAAPKEHQKFKPEKKPKEKSTKKVQDFG- 110
                    |:..|.|:.|.:.|        :.:.|:..           .....::...:|.||
plant   162 VTLMIDFLDRSVGFESCRHSLR--------LCDALVVG-----------YAVAGRTDIALQHFGN 207

  Fly   111 ------DPDTFGDAKV--AATE----DPGDVEEEE--------------FLSNSTRRSKKLKAVE 149
                  |.|:||...:  |..|    |..||..::              .:....::.|..:|.:
plant   208 MRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAED 272

  Fly   150 YARQ---------------IKDHLKANR-LNEAIAVLEQRML----KEDRAKPDKYIYNLLISGC 194
            |.|.               :.|.|.:.| ..||..:|::..|    ..|||      ||:.|...
plant   273 YLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRA------YNIWIRAL 331

  Fly   195 AKAGY-TRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLAKAQILREN---------- 248
            .|||: ...|.||.......|.::....|.|:.               .|:|:||
plant   332 IKAGFLNNPADFLQKISPLEGCELEVFRYNSMV---------------FQLLKENNLDGVYDILT 381

  Fly   249 -MLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLLQA-CASNS-EHG 310
             |:.:|..||.|..||.:..:.:.|.||.|..|.....|......|.::|:|:.. ||:.| |..
plant   382 EMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQA 446

  Fly   311 FRHALLTWHNMLQRGISPDYY----SFNAMLRCARDCGFGDLDSMREVIDKIAPSAARKKPVLQL 371
            :        ::|:..|...::    :|:.:....  |..|..|..||::               :
plant   447 Y--------DVLKGAIDRGHFLGGKTFSTLTNAL--CWKGKPDMARELV---------------I 486

  Fly   372 EKGQQDDLPSVEANTTTLPAQIEVATTASELELPNLLLPQPHLGSLVALEEVTRPHERFLLLGGL 436
            ...::|.||...|....:.|..:|......|.:..|....   |...:.:..|.     |:.|.:
plant   487 AAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKS---GVDTSFKMFTS-----LIYGSI 543

  Fly   437 T--------GFLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQLLTFVRKIGL---KADIDFFNI 490
            |        ..:..|::...||....:..:::.:....:.||...|.:.|..|   :..:..:|:
plant   544 TLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNL 608

  Fly   491 LIKKRSMRFDYESAKEVLLMIRTAGLRPDIVTYGVLAL-----------------GCRTQEEARE 538
            .|:........:.|:.|..|:...|:.|.:.: .:|.|                 ..|.|.:.::
plant   609 FIEGAGFAGKPKLARLVYDMMDRDGITPTVAS-NILMLQSYLKNEKIADALHFFHDLREQGKTKK 672

  Fly   539 LLEQMHVAGIKMNMPILGAMLRQGC-ANK---SFSYVNEIIQLSLEEGLKPNEAFLRHLHNFHRG 599
            .|.|:.:.|:              | |||   :..::.|:    ..|||:|:
plant   673 RLYQVMIVGL--------------CKANKLDDAMHFLEEM----KGEGLQPS------------- 706

  Fly   600 CARAIDARHPSTKTAAFKKGHSKFCDKYRLYYEEQGL------SGLKLEDAIAKVKERPYDQFKL 658
                         ...::....|.|::.: |.|..||      ||.::...|..|
plant   707 -------------IECYEVNIQKLCNEEK-YDEAVGLVNEFRKSGRRITAFIGNV---------- 747

  Fly   659 PPVNGMEPLKHEQLKHK------TKQRKYIKKIKIHELK 691
                    |.|..:|.|      |:.|..  :.||.|:|
plant   748 --------LLHNAMKSKGVYEAWTRMRNI--EDKIPEMK 776

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	12/43 (28%)
		PPR_2	182..231	CDD:289786	12/49 (24%)
		PPR	185..215	CDD:279828	9/30 (30%)
		PPR repeat	186..213	CDD:276811	9/27 (33%)
		PPR repeat	219..252	CDD:276811	7/43 (16%)
		PPR_1	252..284	CDD:289614	11/31 (35%)
		PPR_2	256..304	CDD:289786	14/48 (29%)
		PPR repeat	258..287	CDD:276811	8/28 (29%)
		PPR repeat	293..324	CDD:276811	8/32 (25%)
		PPR repeat	330..357	CDD:276811	6/30 (20%)
		PPR repeat	485..514	CDD:276811	5/28 (18%)
		PPR repeat	552..576	CDD:276811	5/27 (19%)
AT1G71210	NP_177277.2	PLN03218	<187..>508	CDD:215636	76/377 (20%)
		PPR repeat	187..211	CDD:276811	4/34 (12%)
		PPR repeat	217..246	CDD:276811	7/28 (25%)
		PPR repeat	251..275	CDD:276811	3/23 (13%)
		PPR repeat	323..351	CDD:276811	10/33 (30%)
		PLN03218	<360..>729	CDD:215636	82/462 (18%)
		PPR repeat	360..386	CDD:276811	7/40 (18%)
		PPR repeat	392..421	CDD:276811	8/28 (29%)
		PPR repeat	427..451	CDD:276811	7/31 (23%)
		PPR repeat	497..525	CDD:276811	5/27 (19%)
		PPR repeat	532..561	CDD:276811	5/33 (15%)
		PPR repeat	570..594	CDD:276811	3/23 (13%)
		PPR repeat	605..632	CDD:276811	5/26 (19%)
		PPR repeat	644..667	CDD:276811	2/22 (9%)
		PPR repeat	672..701	CDD:276811	8/46 (17%)
		PPR repeat	707..736	CDD:276811	6/29 (21%)
		PPR repeat	742..766	CDD:276811	7/41 (17%)
		PPR repeat	810..838	CDD:276811
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000