DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and AT1G63150

DIOPT Version :9

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_001323422.1 Gene:AT1G63150 / 842619 AraportID:AT1G63150 Length:629 Species:Arabidopsis thaliana


Alignment Length:555 Identity:115/555 - (20%)
Similarity:207/555 - (37%) Gaps:145/555 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 FLSNSTRRSK---------KLKAVEYARQI-------KDHLKANRLNEAIAVLEQRMLKEDRAKP 182
            |::...|||:         |:..:.|...|       ..:..:.|:::|:|:::|  :.|...||
plant   124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ--MVEMGYKP 186

  Fly   183 DKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQ---VTGGTYTS-------------------- 224
            |.:.:..||.|........:|..|..:|.|||.|   ||.||..:                    
plant   187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251

  Fly   225 --------LFNACANAPSVSDGLAK------AQILRENMLEKGYEPNVKNYNAMIKA---YGRCG 272
                    :||      ::.|.|.|      |..|...|..||..|||..||::|..   |||..
plant   252 ARIKANVVIFN------TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310

  Fly   273 DVDTAYMLADEMMERQLELNADTFNFLLQACASNSEHGFRHALLT-----WHNMLQRGISPDYYS 332
            |   |..|...|:|:::..|..|||.|:.|.       |:...|.     ...|:||.|.||..:
plant   311 D---ASRLLSNMLEKKINPNVVTFNALIDAF-------FKEGKLVEAEKLHEEMIQRSIDPDTIT 365

  Fly   333 FNAMLRCARDCGFGDLDSMREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVAT 397
            :|.::.  ..|....||..:::...:.               .:|.||:::...|.:....:...
plant   366 YNLLIN--GFCMHNRLDEAKQMFKFMV---------------SKDCLPNIQTYNTLINGFCKCKR 413

  Fly   398 TASELELPNLLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLE------------HMKQHNITP 450
            ....:||...:..:..:|:.|....:            :.||.:            .|..:.:..
plant   414 VEDGVELFREMSQRGLVGNTVTYTTI------------IQGFFQAGDCDSAQMVFKQMVSNRVPT 466

  Fly   451 DIETFTAMLEVIPPTNAAEKQLLTF--VRKIGLKADIDFFNILIKKRSMRFDYESAKEVLLMIRT 513
            ||.|::.:|..:......:..|:.|  ::|..::.:|..:|.:|:..........|.::...:  
plant   467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL-- 529

  Fly   514 AGLRPDIVTYGVLALG-C--RTQEEARELLEQMHVAGIKMNMPILGAMLRQGCAN---------- 565
             .::||:|||..:..| |  |..:||.:|..:|...|...|......::|....:          
plant   530 -SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593

  Fly   566 ---KSFSYVNEIIQLSLEEGL----KPNEAFLRHL 593
               :|..:|.:...:||...:    :.:::||..|
plant   594 KEMRSSGFVGDASTISLVTNMLHDGRLDKSFLNML 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PPR_2 <157..196 CDD:289786 11/38 (29%)
PPR_2 182..231 CDD:289786 18/79 (23%)
PPR 185..215 CDD:279828 8/29 (28%)
PPR repeat 186..213 CDD:276811 6/26 (23%)
PPR repeat 219..252 CDD:276811 10/66 (15%)
PPR_1 252..284 CDD:289614 14/34 (41%)
PPR_2 256..304 CDD:289786 20/50 (40%)
PPR repeat 258..287 CDD:276811 11/31 (35%)
PPR repeat 293..324 CDD:276811 8/35 (23%)
PPR repeat 330..357 CDD:276811 4/26 (15%)
PPR repeat 485..514 CDD:276811 4/28 (14%)
PPR repeat 552..576 CDD:276811 3/36 (8%)
AT1G63150NP_001323422.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 104 1.000 Inparanoid score I2129
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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