Sequence 1: | NP_647949.1 | Gene: | CG4611 / 38601 | FlyBaseID: | FBgn0035591 | Length: | 703 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001319294.1 | Gene: | RPF2 / 842564 | AraportID: | AT1G62670 | Length: | 630 | Species: | Arabidopsis thaliana |
Alignment Length: | 465 | Identity: | 105/465 - (22%) |
---|---|---|---|
Similarity: | 188/465 - (40%) | Gaps: | 77/465 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 161 NRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSL 225
Fly 226 FNACANAPSVSDGLAKAQILRENMLEKGYEPNVKNYNAMIKA---YGRCGDVDTAYMLADEMMER 287
Fly 288 QLELNADTFNFLLQACASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLR--CARDCGFGDLDS 350
Fly 351 MREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVATTASELELPNLLLPQPHLG 415
Fly 416 SLVALEEVTRPHERFLLLGGL---------TGFLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQ 471
Fly 472 LLTF--VRKIGLKADIDFFNILIKKRSMRFDYESAKEVLLMIRTAGLRPDIVTYGVLALG-CR-- 531
Fly 532 TQEEARELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVNEIIQLSLEEGLKPNEAFLRHLHNF 596
Fly 597 HRGCARAIDA 606 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4611 | NP_647949.1 | PPR_2 | <157..196 | CDD:289786 | 9/34 (26%) |
PPR_2 | 182..231 | CDD:289786 | 15/48 (31%) | ||
PPR | 185..215 | CDD:279828 | 11/29 (38%) | ||
PPR repeat | 186..213 | CDD:276811 | 10/26 (38%) | ||
PPR repeat | 219..252 | CDD:276811 | 5/32 (16%) | ||
PPR_1 | 252..284 | CDD:289614 | 13/34 (38%) | ||
PPR_2 | 256..304 | CDD:289786 | 18/50 (36%) | ||
PPR repeat | 258..287 | CDD:276811 | 10/31 (32%) | ||
PPR repeat | 293..324 | CDD:276811 | 7/30 (23%) | ||
PPR repeat | 330..357 | CDD:276811 | 4/28 (14%) | ||
PPR repeat | 485..514 | CDD:276811 | 5/28 (18%) | ||
PPR repeat | 552..576 | CDD:276811 | 3/23 (13%) | ||
RPF2 | NP_001319294.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 104 | 1.000 | Inparanoid score | I2129 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.960 |