DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and ABO5

DIOPT Version :10

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_001319203.1 Gene:ABO5 / 841625 AraportID:AT1G51965 Length:653 Species:Arabidopsis thaliana


Alignment Length:538 Identity:116/538 - (21%)
Similarity:211/538 - (39%) Gaps:77/538 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 EEEEFLSNS----TRRSKKLKAVEYARQIKDHLKANRLNEAIAVLE---------------QRML 175
            :.:.||.|.    ..||......:..|.|.|.:..:.::..|:.:.               .|::
plant   130 QNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLV 194

  Fly   176 KEDRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLA 240
            |:...|.:.:.|..|:....::....|||.:|.::|:.|.::....|..|.:|.|....:...  
plant   195 KKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKIDQA-- 257

  Fly   241 KAQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLLQACAS 305
             .|:. |:|.::....:...|..||:..||.|..|.|..|.:||:...|.||...:|.|:|..|.
plant   258 -CQVF-EDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAK 320

  Fly   306 NSEHGFRHALLTWHNMLQRGISPDYYSFNAMLR-CARDCGFGDLDSMREVIDKIAPSAARKKPVL 369
            ...  ...|:..:..|::.|..|:.|:::.:|. ...:.....||.:.|:..:..........|.
plant   321 GKM--VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVR 383

  Fly   370 QLE--------------------KGQQDDLPSVEANTTTLPAQIEVATTASELE----LPNLLLP 410
            .|.                    ||::|...|:..:.......||.....|::.    :.:.::.
plant   384 TLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 448

  Fly   411 QPHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQLLTF 475
            .....:|..|::::..|:.|          |.||:...:|||.|:..::.........::.:..|
plant   449 NTVFSALGKLKQISHIHDLF----------EKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIF 503

  Fly   476 --VRKIGLKADIDFFNILIKKRSMRFDYESAKEVLLMIRTAGLRPDIVTYGVLALGC--RTQ--E 534
              :.:...|.||..:|.||.......|.:.|......::..||.||:|||..| :.|  :|:  |
plant   504 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL-MECFGKTERVE 567

  Fly   535 EARELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVNEIIQL---SLEEGLKPNE---AFLRHL 593
            .|..|.|:|.|.|.:.|:.....:|  .|..|: ....|.:.|   ..::||.|:.   ..|..|
plant   568 MAYSLFEEMLVKGCQPNIVTYNILL--DCLEKN-GRTAEAVDLYSKMKQQGLTPDSITYTVLERL 629

  Fly   594 HNFHRGCARAIDARHPST 611
            .:...|.:| |..::|.|
plant   630 QSVSHGKSR-IRRKNPIT 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PLN03218 <166..>561 CDD:215636 94/440 (21%)
PPR repeat 186..213 CDD:276811 7/26 (27%)
PPR repeat 219..252 CDD:276811 7/32 (22%)
PPR repeat 258..287 CDD:276811 11/28 (39%)
PPR repeat 293..324 CDD:276811 6/30 (20%)
PPR repeat 330..357 CDD:276811 5/27 (19%)
PPR repeat 485..514 CDD:276811 6/28 (21%)
PPR repeat 552..576 CDD:276811 4/23 (17%)
ABO5NP_001319203.1 PPR repeat 133..165 CDD:276811 8/31 (26%)
PPR repeat 173..197 CDD:276811 2/23 (9%)
PPR_2 202..250 CDD:463778 11/47 (23%)
PPR repeat 205..232 CDD:276811 7/26 (27%)
PLN03218 <240..>651 CDD:215636 96/428 (22%)
PPR repeat 240..267 CDD:276811 7/30 (23%)
PPR repeat 273..302 CDD:276811 11/28 (39%)
PPR repeat 308..336 CDD:276811 6/29 (21%)
PPR repeat 412..439 CDD:276811 4/26 (15%)
PPR repeat 447..474 CDD:276811 7/36 (19%)
PPR repeat 482..509 CDD:276811 2/26 (8%)
PPR repeat 515..544 CDD:276811 6/28 (21%)
PPR repeat 550..579 CDD:276811 11/29 (38%)
PPR repeat 585..613 CDD:276811 5/30 (17%)

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