DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT1G31840

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_174467.4	Gene:	AT1G31840 / 840074	AraportID:	AT1G31840	Length:	840	Species:	Arabidopsis thaliana

Alignment Length:	549	Identity:	115/549 - (20%)
Similarity:	198/549 - (36%)	Gaps:	134/549 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   133 EFLSNSTRRSKKLKAVEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKA 197
            :..|.:..:..||..|.::..|..::|:..|..| :|:.:|||.:. ..|:...|.:||.|..:.
plant   342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA-SVVYKRMLCQG-ISPNVVTYTILIKGLCQD 404

  Fly   198 GYTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENMLEKGYEPNVKNYN 262
            |...:||.:|.::.:||::.:..||:||.:......::..|.|    |.|:|::.||.|:|..|.
plant   405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA----LYEDMIKMGYPPDVVIYG 465

  Fly   263 AMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLLQA-CASNSEHGFRHALLTWHNMLQRGI 326
            .::....:.|.:..|...:.:|:.:.:.||...||.|:.. |..|.   |..||..:..|...||
plant   466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR---FDEALKVFRLMGIYGI 527

  Fly   327 SPDYYSFNAMLRCARDCGFGDLDSMREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPA 391
            .||..:|..::|                              :.:.:|:
plant   528 KPDVATFTTVMR------------------------------VSIMEGR---------------- 546

  Fly   392 QIEVATTASELELPNLLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFT 456
                                        |||..     ||..        .|.:..:.||...:.
plant   547 ----------------------------LEEAL-----FLFF--------RMFKMGLEPDALAYC 570

  Fly   457 AMLEV----IPPTNAAEKQLLTFVRKIGLKADIDFFNILIKKRSMRFDYESAKEVLLMIRTAGLR 517
            .:::.    :.||...  ||...:::..:.|||...|::|.........|.|.:....:....:.
plant   571 TLIDAFCKHMKPTIGL--QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633

  Fly   518 PDIVTYGVLALG-C--RTQEEARELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVNEIIQLSL 579
            ||||||..:..| |  |..:||..:.|.:.|.....|...|..::...|.|........:..:..
plant   634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698

  Fly   580 EEGLKPNEAFLRHLHNFHRGC-----ARAIDARHPSTKTAAFK-------KGHSKFCDKYRLYYE 632
            |:|.|||....        ||     ::::|..      .:||       ||.|.....|.:..:
plant   699 EKGSKPNAVTY--------GCLMDWFSKSVDIE------GSFKLFEEMQEKGISPSIVSYSIIID 749

  Fly   633 EQGLSGLKLEDAIAKVKERPYDQFKLPPV 661
              ||......|....:..:..|...||.|
plant   750 --GLCKRGRVDEATNIFHQAIDAKLLPDV 776

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	12/38 (32%)
		PPR_2	182..231	CDD:289786	15/48 (31%)
		PPR	185..215	CDD:279828	9/29 (31%)
		PPR repeat	186..213	CDD:276811	8/26 (31%)
		PPR repeat	219..252	CDD:276811	9/32 (28%)
		PPR_1	252..284	CDD:289614	7/31 (23%)
		PPR_2	256..304	CDD:289786	11/48 (23%)
		PPR repeat	258..287	CDD:276811	5/28 (18%)
		PPR repeat	293..324	CDD:276811	9/31 (29%)
		PPR repeat	330..357	CDD:276811	2/26 (8%)
		PPR repeat	485..514	CDD:276811	5/28 (18%)
		PPR repeat	552..576	CDD:276811	3/23 (13%)
AT1G31840	NP_174467.4	PPR repeat	104..128	CDD:276811
		PPR repeat	146..210	CDD:276811
		PPR_2	252..298	CDD:289786
		PPR repeat	254..280	CDD:276811
		PPR_1	281..313	CDD:289614
		PPR_2	284..333	CDD:289786
		PPR repeat	288..315	CDD:276811
		PPR_1	315..346	CDD:289614	0/3 (0%)
		PPR repeat	321..350	CDD:276811	1/7 (14%)
		PPR_2	355..403	CDD:289786	14/49 (29%)
		PPR repeat	356..383	CDD:276811	7/27 (26%)
		PPR_1	385..413	CDD:289614	8/28 (29%)
		PPR_2	389..438	CDD:289786	15/48 (31%)
		PPR repeat	393..420	CDD:276811	8/26 (31%)
		PPR_1	420..452	CDD:289614	10/35 (29%)
		PPR_2	424..473	CDD:289786	14/52 (27%)
		PPR repeat	426..455	CDD:276811	9/32 (28%)
		PPR repeat	461..488	CDD:276811	4/26 (15%)
		PPR_1	492..522	CDD:289614	10/32 (31%)
		PPR_2	495..539	CDD:289786	15/46 (33%)
		PPR repeat	496..522	CDD:276811	8/28 (29%)
		PPR repeat	531..560	CDD:276811	9/115 (8%)
		PPR repeat	566..595	CDD:276811	4/30 (13%)
		PPR_2	600..647	CDD:289786	13/46 (28%)
		PPR repeat	603..630	CDD:276811	4/26 (15%)
		PPR_1	632..660	CDD:289614	11/27 (41%)
		PPR_2	634..683	CDD:289786	15/48 (31%)
		PPR repeat	638..665	CDD:276811	8/26 (31%)
		PPR_1	669..697	CDD:289614	4/27 (15%)
		PPR repeat	673..700	CDD:276811	3/26 (12%)
		PPR_2	704..753	CDD:289786	13/64 (20%)
		PPR repeat	706..735	CDD:276811	5/42 (12%)
		PPR	707..741	CDD:273253	8/47 (17%)
		PPR_1	735..766	CDD:289614	7/32 (22%)
		PPR_2	739..788	CDD:289786	8/40 (20%)
		PPR repeat	741..766	CDD:276811	4/26 (15%)
		PPR_2	774..>811	CDD:289786	2/3 (67%)
		PPR repeat	776..805	CDD:276811	1/1 (100%)
		PPR	777..811	CDD:273253	115/549 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	104	1.000	Inparanoid score	I2129
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.960