DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and AT1G25360

DIOPT Version :10

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_173907.1 Gene:AT1G25360 / 839121 AraportID:AT1G25360 Length:790 Species:Arabidopsis thaliana


Alignment Length:571 Identity:113/571 - (19%)
Similarity:210/571 - (36%) Gaps:170/571 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 VEEEEFLSNSTRRS----------KKLKAVEYARQ----------IKDHLKANRLNEAIAVLEQR 173
            :|.:||...|..|:          |::.|....|:          :..:.|..:.:||.|:.|:.
plant   282 IELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKM 346

  Fly   174 MLKE-----------------DRAK------PDKYI--YNLLISGCAKAGYTRKAFFLYTKMRQR 213
            ..|:                 ..||      .:|.|  :.::|||.|:.|:..:...|::.|::.
plant   347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE 411

  Fly   214 GLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAY 278
            |.:.....::....:||    |.......|.....:|:.|::.::...||:|..|.:||.|:.| 
plant   412 GFEPCDYAFSGAIKSCA----VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEA- 471

  Fly   279 MLADEMMERQLE-----LNADTFNFLLQACASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLR 338
                    ||:.     |::.::|.|:.|...:. || ..|:..:..||::||.||..:...:|.
plant   472 --------RQVFRTMPCLDSVSWNALIAALGQHG-HG-AEAVDVYEEMLKKGIRPDRITLLTVLT 526

  Fly   339 CARDCGFGD-----LDSMREVIDKIAPSAARKKPVLQL--EKGQQDDLPSVEANTTTLP-AQIEV 395
            .....|..|     .||| |.:.:|.|.|.....::.|  ..|:..|..||..:....| |:|..
plant   527 ACSHAGLVDQGRKYFDSM-ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWE 590

  Fly   396 ATTA-----SELELPNL-------LLPQPHLGSLVAL----------EEVTRPHERFLLLGGLTG 438
            |..:     ..:||..:       |:|: |.|:.:.|          |||.|..:.         
plant   591 ALLSGCRVHGNMELGIIAADKLFGLIPE-HDGTYMLLSNMHAATGQWEEVARVRKL--------- 645

  Fly   439 FLEHMKQHNITPDIETFTAMLE------VIPPTNAAEKQLLTF--------VRKIGLKADIDFFN 489
                |:...:..::......:|      ::..|:..|.:.:..        :|::|...|..|  
plant   646 ----MRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSF-- 704

  Fly   490 ILIKKRSMRFDYESAKEVLLMIRTAGLRPDIVTYGVLALGCRTQEEARELLEQMHVAGIKMNMP- 553
                             ||..:.:.|.:.|::|         |..      |::.||...|.:| 
plant   705 -----------------VLHDVESDGHKEDMLT---------THS------EKIAVAFGLMKLPP 737

  Fly   554 -----ILGAMLRQGCANKSFSYVNEIIQLSLEEGLKPNEAFLRHLHNFHRG 599
                 |...:...|..:..|.:::.::|..:.  |:..:.|    |:|..|
plant   738 GTTIRIFKNLRTCGDCHNFFRFLSWVVQRDII--LRDRKRF----HHFRNG 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PLN03218 <166..>561 CDD:215636 95/474 (20%)
PPR repeat 186..213 CDD:276811 8/28 (29%)
PPR repeat 219..252 CDD:276811 5/32 (16%)
PPR repeat 258..287 CDD:276811 8/28 (29%)
PPR repeat 293..324 CDD:276811 8/30 (27%)
PPR repeat 330..357 CDD:276811 7/31 (23%)
PPR repeat 485..514 CDD:276811 3/28 (11%)
PPR repeat 552..576 CDD:276811 4/29 (14%)
AT1G25360NP_173907.1 PLN03077 <30..788 CDD:215561 113/571 (20%)
PPR repeat 51..77 CDD:276811
PPR repeat 84..108 CDD:276811
PPR repeat 113..142 CDD:276811
PPR repeat 188..217 CDD:276811
PPR repeat 221..248 CDD:276811
PPR repeat 253..280 CDD:276811
PPR repeat 286..349 CDD:276811 12/62 (19%)
PPR repeat 351..380 CDD:276811 2/28 (7%)
PPR repeat 382..411 CDD:276811 8/28 (29%)
PPR repeat 456..479 CDD:276811 10/31 (32%)
PPR repeat 485..512 CDD:276811 8/28 (29%)
PPR repeat 518..548 CDD:276811 7/30 (23%)
PPR repeat 554..580 CDD:276811 6/25 (24%)
PPR repeat 619..649 CDD:276811 8/42 (19%)
Blue background indicates that the domain is not in the aligned region.

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