DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and AT1G22950

DIOPT Version :10

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_173708.3 Gene:AT1G22950 / 838902 AraportID:AT1G22950 Length:397 Species:Arabidopsis thaliana


Alignment Length:400 Identity:67/400 - (16%)
Similarity:126/400 - (31%) Gaps:140/400 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 QAGLETKREANRNQNPFREEVFEELITAAPKEH--------QKFKPEKKPKEKSTKKVQDFGD-- 111
            :|.|:.:|..|....|   |.:|:|    |.::        :::.||:........|.....|  
plant    35 EARLKLRRTPNEEHEP---ENYEDL----PLDYSPSLFTSLERYLPEQLLNSTRIDKASFMRDLL 92

  Fly   112 ----PDT----------FGDAKVAA---------TEDPGDVEEEEFLSNSTRRSKKLKAVEYARQ 153
                |||          :.|..:::         |.||.......||...:|:|           
plant    93 LRYSPDTERVRVLRHKEYRDKIMSSYQRLHGEIYTLDPSSFFAPSFLGAFSRKS----------- 146

  Fly   154 IKDHLKANRLNEAIAVLEQRMLKEDRAK--------PDKYIYNLLISGCAKAGYTRKAFFLYTKM 210
             :.:.:::.:.....:....|.|....:        .:|::|:           :|........|
plant   147 -EPNFRSSMVESYPGIFTFEMFKPQFCEMLLAEVEHMEKWVYD-----------SRSTIMRPNTM 199

  Fly   211 RQRGLQVTGGTYTSLFNACANAPSVSDGLAK-AQILRENMLEKGYEPNVKNYNAMIKAYGRCGDV 274
            ...|:.:....:.|:....     |.|.::. ||:|...:.    ..::.:::..|..||:..||
plant   200 NNFGVVLDDFGFDSMLQKL-----VDDFISPIAQVLFPEVC----GTSLDSHHGYIVEYGKDRDV 255

  Fly   275 DTAYMLADEMMERQL--------------------ELNADTFNFLLQACASNSEHGFRHALLTWH 319
            |..:.:.|..:...:                    .:|:|          |..:..:.::.:..|
plant   256 DLGFHVDDSEVSLNVCLGKQFSGGELYFRGVRCDKHVNSD----------STEKEVYDYSHVPGH 310

  Fly   320 NMLQRG-------ISPDYYSFNAMLRC-----------ARD----CGFGDLDSMREVIDKI---- 358
            .:|.||       .:...:..|.:|.|           .||    ||...||..|...|.|    
plant   311 AILHRGRHRHGARATTSGHRANLILWCRSSTFREMKNYQRDFSGWCGGCKLDKQRRQRDSINATK 375

  Fly   359 ---APSAARK 365
               |..||.|
plant   376 EILARKAAEK 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PLN03218 <166..>561 CDD:215636 42/257 (16%)
PPR repeat 186..213 CDD:276811 3/26 (12%)
PPR repeat 219..252 CDD:276811 6/33 (18%)
PPR repeat 258..287 CDD:276811 7/28 (25%)
PPR repeat 293..324 CDD:276811 4/30 (13%)
PPR repeat 330..357 CDD:276811 10/41 (24%)
PPR repeat 485..514 CDD:276811
PPR repeat 552..576 CDD:276811
AT1G22950NP_173708.3 P4Hc 169..338 CDD:214780 27/198 (14%)
Blue background indicates that the domain is not in the aligned region.

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