Sequence 1: | NP_647949.1 | Gene: | CG4611 / 38601 | FlyBaseID: | FBgn0035591 | Length: | 703 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_172694.1 | Gene: | AT1G12300 / 837784 | AraportID: | AT1G12300 | Length: | 637 | Species: | Arabidopsis thaliana |
Alignment Length: | 463 | Identity: | 111/463 - (23%) |
---|---|---|---|
Similarity: | 186/463 - (40%) | Gaps: | 81/463 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 162 RLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLF 226
Fly 227 NA-CANAPS------------------------VSDGLAK------AQILRENMLEKGYEPNVKN 260
Fly 261 YNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLLQACASNSEHGFRHALLTWHNMLQRG 325
Fly 326 ISPDYYSFNAMLRCARD--CGFGDLDSMREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTT 388
Fly 389 LPAQIEVATTASELELPNLLLPQPHLGSLVALEEVTRPH--ERFLLLGGLT---GFLEHMKQHNI 448
Fly 449 TPDIETFTAMLEVIPPTNAAEKQLLTF--VRKIGLKADIDFFNILIKKRSMRFDYESAKEVLLMI 511
Fly 512 RTAGLRPDIVTYGVLALG-CR--TQEEARELLEQMHVAGIKMNMP-------ILGAMLRQGCANK 566
Fly 567 SFSYVNEI 574 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4611 | NP_647949.1 | PPR_2 | <157..196 | CDD:289786 | 12/33 (36%) |
PPR_2 | 182..231 | CDD:289786 | 16/49 (33%) | ||
PPR | 185..215 | CDD:279828 | 8/29 (28%) | ||
PPR repeat | 186..213 | CDD:276811 | 8/26 (31%) | ||
PPR repeat | 219..252 | CDD:276811 | 11/63 (17%) | ||
PPR_1 | 252..284 | CDD:289614 | 9/31 (29%) | ||
PPR_2 | 256..304 | CDD:289786 | 13/47 (28%) | ||
PPR repeat | 258..287 | CDD:276811 | 7/28 (25%) | ||
PPR repeat | 293..324 | CDD:276811 | 7/30 (23%) | ||
PPR repeat | 330..357 | CDD:276811 | 4/28 (14%) | ||
PPR repeat | 485..514 | CDD:276811 | 5/28 (18%) | ||
PPR repeat | 552..576 | CDD:276811 | 8/30 (27%) | ||
AT1G12300 | NP_172694.1 | PPR_2 | 86..135 | CDD:289786 | |
PPR repeat | 90..117 | CDD:276811 | |||
PPR_2 | 122..169 | CDD:289786 | |||
PPR repeat | 125..152 | CDD:276811 | |||
PPR_1 | 153..185 | CDD:289614 | 4/12 (33%) | ||
PPR_2 | 156..204 | CDD:289786 | 12/32 (38%) | ||
PPR repeat | 160..187 | CDD:276811 | 5/15 (33%) | ||
PPR_1 | 187..220 | CDD:289614 | 10/32 (31%) | ||
PPR repeat | 193..222 | CDD:276811 | 8/28 (29%) | ||
PPR_2 | 226..275 | CDD:289786 | 7/48 (15%) | ||
PPR_3 | 228..260 | CDD:290526 | 4/31 (13%) | ||
PPR repeat | 228..257 | CDD:276811 | 4/28 (14%) | ||
PPR_1 | 257..290 | CDD:289614 | 6/32 (19%) | ||
PPR_2 | 262..310 | CDD:289786 | 13/47 (28%) | ||
PPR repeat | 266..292 | CDD:276811 | 7/25 (28%) | ||
PPR_1 | 292..324 | CDD:289614 | 9/31 (29%) | ||
PPR repeat | 300..327 | CDD:276811 | 7/26 (27%) | ||
PPR_1 | 327..359 | CDD:289614 | 8/33 (24%) | ||
PPR_2 | 331..380 | CDD:289786 | 14/54 (26%) | ||
PPR repeat | 335..362 | CDD:276811 | 7/28 (25%) | ||
PPR_1 | 362..395 | CDD:289614 | 11/48 (23%) | ||
PPR_2 | 366..415 | CDD:289786 | 13/71 (18%) | ||
PPR repeat | 370..397 | CDD:276811 | 6/42 (14%) | ||
PPR_1 | 397..430 | CDD:289614 | 7/39 (18%) | ||
PPR repeat | 403..432 | CDD:276811 | 4/28 (14%) | ||
PPR_1 | 432..465 | CDD:289614 | 8/33 (24%) | ||
PPR_2 | 437..485 | CDD:289786 | 11/47 (23%) | ||
PPR repeat | 438..467 | CDD:276811 | 7/28 (25%) | ||
PPR_1 | 467..500 | CDD:289614 | 8/32 (25%) | ||
PPR repeat | 473..502 | CDD:276811 | 7/28 (25%) | ||
PPR_2 | 507..555 | CDD:289786 | 11/47 (23%) | ||
PPR repeat | 508..534 | CDD:276811 | 5/25 (20%) | ||
PPR | 510..543 | CDD:273253 | 6/32 (19%) | ||
PPR_1 | 537..570 | CDD:289614 | 9/32 (28%) | ||
PPR_2 | 541..588 | CDD:289786 | 11/49 (22%) | ||
PPR repeat | 543..572 | CDD:276811 | 8/28 (29%) | ||
PPR repeat | 578..606 | CDD:276811 | 7/27 (26%) | ||
PPR_2 | 580..625 | CDD:289786 | 7/25 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 104 | 1.000 | Inparanoid score | I2129 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.960 |