DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and AT1G11710

DIOPT Version :9

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_172636.1 Gene:AT1G11710 / 837715 AraportID:AT1G11710 Length:657 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PPR_2 <157..196 CDD:289786
PPR_2 182..231 CDD:289786
PPR 185..215 CDD:279828
PPR repeat 186..213 CDD:276811
PPR repeat 219..252 CDD:276811
PPR_1 252..284 CDD:289614
PPR_2 256..304 CDD:289786
PPR repeat 258..287 CDD:276811
PPR repeat 293..324 CDD:276811
PPR repeat 330..357 CDD:276811
PPR repeat 485..514 CDD:276811
PPR repeat 552..576 CDD:276811
AT1G11710NP_172636.1 PPR repeat 150..177 CDD:276811
PPR_2 182..230 CDD:289786
PPR repeat 185..212 CDD:276811
PPR_2 217..265 CDD:289786
PPR repeat 218..247 CDD:276811
PPR 220..253 CDD:273253
PPR_2 251..303 CDD:289786
PPR_1 251..279 CDD:289614
PPR repeat 255..285 CDD:276811
PPR_1 287..318 CDD:289614
PPR_2 289..338 CDD:289786
PPR repeat 293..320 CDD:276811
PPR repeat 326..355 CDD:276811
PPR 327..361 CDD:273253
PPR_2 360..408 CDD:289786
PPR repeat 361..390 CDD:276811
PPR repeat 401..425 CDD:276811
PPR_2 430..478 CDD:289786
PPR repeat 433..460 CDD:276811
PPR_1 460..492 CDD:289614
PPR_2 465..513 CDD:289786
PPR repeat 466..495 CDD:276811
PPR repeat 503..530 CDD:276811
PPR_2 530..581 CDD:289786
PPR_3 532..561 CDD:290526
PPR repeat 534..561 CDD:276811
PPR repeat 569..598 CDD:276811
PPR_2 570..616 CDD:289786
PPR 570..604 CDD:273253
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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