DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and AT1G09820

DIOPT Version :10

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_172453.1 Gene:AT1G09820 / 837514 AraportID:AT1G09820 Length:606 Species:Arabidopsis thaliana


Alignment Length:447 Identity:93/447 - (20%)
Similarity:182/447 - (40%) Gaps:88/447 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 LKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTY 222
            ||.||..:...|.::.:.:  :.:|:.:.:|::|:...|.|...||..:...|:..|......:|
plant   199 LKENRSADVEYVYKEMIRR--KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 261

  Fly   223 TSLFNACANAPSVSDGLAKAQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMER 287
            .:|.:....... :..:.||..:.:.|:|....||:..:|.:|..:.:..::..:..:..||:::
plant   262 NTLIDGYCKLGG-NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325

  Fly   288 QLELNADTFNFLLQACASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLRCARDCGFGDLDSMR 352
            .::.|..::|.|:....:..:  ...|:.....|:..|:.|:..::||::.     ||...|.::
plant   326 DVKPNVISYNSLINGLCNGGK--ISEAISMRDKMVSAGVQPNLITYNALIN-----GFCKNDMLK 383

  Fly   353 EVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVATTASELELPNLLLPQPHLGSL 417
            |.:|...                            ::..|..|.||    .:.|:|:        
plant   384 EALDMFG----------------------------SVKGQGAVPTT----RMYNMLI-------- 408

  Fly   418 VALEEVTRPHERFLLLGGL-TGFL--EHMKQHNITPDIETFTAMLEVIPPTN--AAEKQLLTFVR 477
                      :.:..||.: .||.  |.|::..|.||:.|:..::..:....  .|.|:|...:.
plant   409 ----------DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463

  Fly   478 KIGLKADIDFFNILIKKRSMRFDYESAKEVLLMIRTAGLRPDIVTYGVLALG-C----------- 530
            ..|| .|:..|:||::....:.:...|..:|..:...||:|..:||.::..| |           
plant   464 SKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527

  Fly   531 RTQEEARELLEQMHVAGIKMNMPILGAMLRQGCANK-SFSYVNEIIQLSLEEGLKPN 586
            |||.|....| :|:||...        :|.||.:.| .....|.::...||:||.||
plant   528 RTQMEKERRL-RMNVASYN--------VLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PLN03218 <166..>561 CDD:215636 79/411 (19%)
PPR repeat 186..213 CDD:276811 7/26 (27%)
PPR repeat 219..252 CDD:276811 5/32 (16%)
PPR repeat 258..287 CDD:276811 4/28 (14%)
PPR repeat 293..324 CDD:276811 4/30 (13%)
PPR repeat 330..357 CDD:276811 6/26 (23%)
PPR repeat 485..514 CDD:276811 5/28 (18%)
PPR repeat 552..576 CDD:276811 5/24 (21%)
AT1G09820NP_172453.1 PPR repeat 159..182 CDD:276811
PPR repeat 190..217 CDD:276811 5/17 (29%)
PPR_2 194..235 CDD:463778 8/37 (22%)
PLN03218 <221..>579 CDD:215636 88/423 (21%)
PPR repeat 225..252 CDD:276811 7/26 (27%)
PPR repeat 258..290 CDD:276811 5/32 (16%)
PPR repeat 296..324 CDD:276811 4/27 (15%)
PPR repeat 333..360 CDD:276811 4/28 (14%)
PPR repeat 368..395 CDD:276811 7/59 (12%)
PPR repeat 401..430 CDD:276811 9/50 (18%)
PPR repeat 436..465 CDD:276811 4/28 (14%)
PPR repeat 470..499 CDD:276811 5/28 (18%)
PPR repeat 505..534 CDD:276811 8/28 (29%)
PPR repeat 541..570 CDD:276811 8/36 (22%)
Blue background indicates that the domain is not in the aligned region.

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