DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4611 and AT1G09680

DIOPT Version :9

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_172439.1 Gene:AT1G09680 / 837496 AraportID:AT1G09680 Length:607 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PPR_2 <157..196 CDD:289786
PPR_2 182..231 CDD:289786
PPR 185..215 CDD:279828
PPR repeat 186..213 CDD:276811
PPR repeat 219..252 CDD:276811
PPR_1 252..284 CDD:289614
PPR_2 256..304 CDD:289786
PPR repeat 258..287 CDD:276811
PPR repeat 293..324 CDD:276811
PPR repeat 330..357 CDD:276811
PPR repeat 485..514 CDD:276811
PPR repeat 552..576 CDD:276811
AT1G09680NP_172439.1 PPR_1 235..265 CDD:289614
PPR_2 239..287 CDD:289786
PPR repeat 242..269 CDD:276811
PPR_1 269..302 CDD:289614
PPR_2 273..322 CDD:289786
PPR repeat 277..304 CDD:276811
PPR_1 307..336 CDD:289614
PPR_2 308..357 CDD:289786
PPR repeat 310..339 CDD:276811
PPR repeat 345..374 CDD:276811
PPR 346..380 CDD:273253
PPR_1 374..406 CDD:289614
PPR_2 378..427 CDD:289786
PPR repeat 380..409 CDD:276811
PPR_1 409..441 CDD:289614
PPR repeat 417..444 CDD:276811
PPR_2 449..497 CDD:289786
PPR repeat 450..479 CDD:276811
PPR 453..485 CDD:273253
PPR_1 480..512 CDD:289614
PPR_2 483..532 CDD:289786
PPR repeat 485..514 CDD:276811
PPR_1 514..546 CDD:289614
PPR_2 518..567 CDD:289786
PPR repeat 520..547 CDD:276811
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54853
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.