DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG4611 and AT1G07740

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_172253.1	Gene:	AT1G07740 / 837288	AraportID:	AT1G07740	Length:	459	Species:	Arabidopsis thaliana

Alignment Length:	555	Identity:	111/555 - (20%)
Similarity:	194/555 - (34%)	Gaps:	180/555 - (32%)

- Green bases have known domain annotations that are detailed below.

  Fly    84 AAPKEHQKFKPEKKPKEKSTKKVQDFGDPDTFGDAKVAATEDPGDVEEEEFLSNSTRRSKKLKAV 148
            |:.:.:...:|     ||.|||.........|       |..|.  ||..||::       ||.:
plant    16 ASQRHYHTSRP-----EKPTKKASSHEPTHKF-------TRKPW--EEVPFLTD-------LKEI 59

  Fly   149 E-----------------------YARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLL 190
            |                       |:..|....|:...:....:|  |:::....:..:.::..|
plant    60 EDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQIL--RLVRYRNVRCRESLFMGL 122

  Fly   191 ISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDG-LAKAQILRENMLEKGY 254
            |....|||...||..::.|:.......|..:..:|.|..     |.:| |.||:...:...:...
plant   123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVL-----VDNGELEKAKSFFDGAKDMRL 182

  Fly   255 EPNVKNYNAMIKAY-GRCGDVDTAYMLADEMMERQLELNADTFNFLLQACASNSEHGFRHALLTW 318
            .||..::|.:||.: .:| |.:.|..:.|||:|.:::.:..|:|.|:.....|.:.|...:||
plant   183 RPNSVSFNILIKGFLDKC-DWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLL-- 244

  Fly   319 HNMLQRGISPDYYSFNAMLR--CARDCGFGDLDSMREVIDKIAPSAARKKPVLQLE-KGQQDDLP 380
            .:|:::.|.|:..:|..:::  |.:    |:.:.             .||.:..:| :|.:
plant   245 EDMIKKRIRPNAVTFGLLMKGLCCK----GEYNE-------------AKKLMFDMEYRGCK---- 288

  Fly   381 SVEANTTTLPAQIEVATTASELELPNLLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQ 445
                     |..:......|:            ||....::|..      ||||       .||:
plant   289 ---------PGLVNYGILMSD------------LGKRGRIDEAK------LLLG-------EMKK 319

  Fly   446 HNITPDIETFTAMLEVIPPTNAAEKQLLTFVRKIGLKADIDFFNILIKKRSMRFDYESAKEVLLM 510
            ..|.||:        ||                         :|||:...........|..||..
plant   320 RRIKPDV--------VI-------------------------YNILVNHLCTECRVPEAYRVLTE 351

  Fly   511 IRTAGLRPDIVTYGVLALG-CRTQE------EARELLEQMH----------VAGIKMNMPILGAM 558
            ::..|.:|:..||.::..| ||.::      ....:|...|          |||:     |.|..
plant   352 MQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGL-----IKGGN 411

  Fly   559 LRQGC--------ANKSF---SYVNEIIQLSLEEG 582
            |...|        .|.||   ::.|.:..|.:::|
plant   412 LDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDG 446

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	5/38 (13%)
		PPR_2	182..231	CDD:289786	11/48 (23%)
		PPR	185..215	CDD:279828	8/29 (28%)
		PPR repeat	186..213	CDD:276811	8/26 (31%)
		PPR repeat	219..252	CDD:276811	7/33 (21%)
		PPR_1	252..284	CDD:289614	9/32 (28%)
		PPR_2	256..304	CDD:289786	15/48 (31%)
		PPR repeat	258..287	CDD:276811	9/29 (31%)
		PPR repeat	293..324	CDD:276811	8/30 (27%)
		PPR repeat	330..357	CDD:276811	3/28 (11%)
		PPR repeat	485..514	CDD:276811	6/28 (21%)
		PPR repeat	552..576	CDD:276811	8/34 (24%)
AT1G07740	NP_172253.1	PLN03218	<60..>432	CDD:215636	92/474 (19%)
		PPR repeat	83..110	CDD:276811	5/28 (18%)
		PPR repeat	122..145	CDD:276811	8/22 (36%)
		PPR repeat	153..180	CDD:276811	7/31 (23%)
		PPR repeat	188..215	CDD:276811	9/27 (33%)
		PPR repeat	223..250	CDD:276811	8/28 (29%)
		PPR repeat	256..285	CDD:276811	6/45 (13%)
		PPR repeat	291..320	CDD:276811	10/53 (19%)
		PPR repeat	326..355	CDD:276811	8/61 (13%)
		PPR repeat	361..388	CDD:276811	5/26 (19%)
		PPR repeat	396..425	CDD:276811	7/33 (21%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000