DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT1G07590

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_172238.1	Gene:	AT1G07590 / 837272	AraportID:	AT1G07590	Length:	534	Species:	Arabidopsis thaliana

Alignment Length:	653	Identity:	129/653 - (19%)
Similarity:	211/653 - (32%)	Gaps:	219/653 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    69 NQNPFREEVFEELITAAPKEHQKF-----KPEKKPKEKSTKKVQDFGDPDTFGDAKVAATED--- 125
            ||..|:...|...:.::.|..::.     :.|::|.:..:.:::......|.|.|..:...|
plant    30 NQTNFQASSFLTTLISSKKSPEETCIGSEEEEEEPNKCLSLRIEKLPKGVTVGSALQSWMGDGFP 94

  Fly   126 --PGDVEEEEFLSNSTRRSKKLKAVEYARQIKDHL---KANRLNEAIAVLEQRMLKEDRAK---- 181
              .|||      .::..|.:||...:.|.::.:.:   :..||.|    ||...|.|...|
plant    95 VHGGDV------YHAINRLRKLGRNKRALELMEWIIRERPYRLGE----LEYSYLLEFTVKLHGV 149

  Fly   182 ----------PDKY----IYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLF--NACA 230
                      |.::    :||.|:..|...|..|.|.....|||:.|.:.:...|..|.  |
plant   150 SQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVYNRLIIRN--- 211

  Fly   231 NAPSVSDGLAKAQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADT 295
            :||.           |..::.|                      |.|.|.||:...     :..|
plant   212 SAPG-----------RRKLIAK----------------------DLALMKADKATP-----HVST 238

  Fly   296 FNFLLQACASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLRCARDCGFGDLDSMREVIDKIAP 360
            ::.|::..|  :||.....|..:..|.:.|:.|:..|:         |           |..:|.
plant   239 YHILMKLEA--NEHNIDGVLKAFDGMKKAGVEPNEVSY---------C-----------ILAMAH 281

  Fly   361 SAARKKPVL-----QLEKGQQDDLPSVEANTTTLP-AQIEVATTASELELP---NLLLPQPHLGS 416
            :.||...|.     ::||....|      |.:||. ..|.......|.||.   |::....|:.|
plant   282 AVARLYTVAEAYTEEIEKSITGD------NWSTLDILMILYGRLGKEKELARTWNVIRGFHHVRS 340

  Fly   417 ---LVALE------EVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQL 472
               |:|.|      .:.|..|.:|.:..:.|..|          .|.|.::|.|.......||.:
plant   341 KSYLLATEAFARVGNLDRAEELWLEMKNVKGLKE----------TEQFNSLLSVYCKDGLIEKAI 395

  Fly   473 LTFVRKIGLKADIDFFNILIKKRSMRFDYESAKEVLLMIRTAGLRPDIVTYGVLALGCRTQEEAR 537
            ..|....|                                 .|.:|:.:||..|||||...:..:
plant   396 GVFREMTG---------------------------------NGFKPNSITYRHLALGCAKAKLMK 427

  Fly   538 ELLEQMHVA-GIKMNMPILGAMLRQGCANKSFSYVNEIIQLSLEEG-LKPNEAFLRHLHNFHRGC 600
            |.|:.:.:. .:|.:..|       |.:.........||:...|:| ::.:|.....:.|
plant   428 EALKNIEMGLNLKTSKSI-------GSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKN----- 480

  Fly   601 ARAIDARHPSTKTAAFKKGHSKFCDKYRLYYEEQGLSGLKLEDAIAKVKERPYDQ--FKLPPVNG 663
              |...|:.....|.||                            |.||.:.||.  ||...:.|
plant   481 --AKYNRYAFVYNALFK----------------------------AYVKAKVYDPNLFKRMVLGG 515

  Fly   664 MEP 666
            ..|
plant   516 ARP 518

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	13/59 (22%)
		PPR_2	182..231	CDD:289786	15/54 (28%)
		PPR	185..215	CDD:279828	10/33 (30%)
		PPR repeat	186..213	CDD:276811	10/26 (38%)
		PPR repeat	219..252	CDD:276811	6/34 (18%)
		PPR_1	252..284	CDD:289614	6/31 (19%)
		PPR_2	256..304	CDD:289786	7/47 (15%)
		PPR repeat	258..287	CDD:276811	5/28 (18%)
		PPR repeat	293..324	CDD:276811	7/30 (23%)
		PPR repeat	330..357	CDD:276811	3/26 (12%)
		PPR repeat	485..514	CDD:276811	0/28 (0%)
		PPR repeat	552..576	CDD:276811	3/23 (13%)
AT1G07590	NP_172238.1	PLN03218	<102..>519	CDD:215636	115/575 (20%)
		PPR repeat	169..195	CDD:276811	10/25 (40%)
		PPR repeat	238..265	CDD:276811	7/28 (25%)
		PPR repeat	376..404	CDD:276811	8/60 (13%)
		PPR repeat	452..479	CDD:276811	5/26 (19%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000