DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT5G65820

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_201383.1	Gene:	AT5G65820 / 836711	AraportID:	AT5G65820	Length:	637	Species:	Arabidopsis thaliana

Alignment Length:	683	Identity:	132/683 - (19%)
Similarity:	240/683 - (35%)	Gaps:	197/683 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    17 LQLNATGRRLNSYNISRLVILPA----------TWSCSQNRLLHVRITDQQAGLETKREANRNQN 71
            |.||.:|..|....|.|::....          .|:..|.|..|
plant   102 LALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCH--------------------- 145

  Fly    72 PFREEVFEELITAAPKEHQKFKPEKKPKEKSTKKVQDFGDPDTFGDAKVAATEDPGDVEEEEFLS 136
              ..||::.::                  |...|::.||  ..:|..:....|:|..:|.|.|:.
plant   146 --SIEVYKSMV------------------KILSKMRQFG--AVWGLIEEMRKENPQLIEPELFVV 188

  Fly   137 NSTRRSKKLKAVEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAGYTR 201
                            .::....|:.:.:||.||::  :.:...:||:|::..|:....|.|..:
plant   189 ----------------LVQRFASADMVKKAIEVLDE--MPKFGFEPDEYVFGCLLDALCKHGSVK 235

  Fly   202 KAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENMLEKGYEPNVKNYNAMIK 266
            .|..|:..||.| ..|....:|||.........:.:  ||..:::.|  |.|:||::.:|..::.
plant   236 DAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMME--AKYVLVQMN--EAGFEPDIVDYTNLLS 295

  Fly   267 AYGRCGDVDTAYMLADEMMERQLELNADTFNFLLQACASNSEHGFRHALLTWHNMLQRGISPDYY 331
            .|...|.:..||.|..:|..|..|.||:.:..|:||......  ...|:..:..|.:.....|..
plant   296 GYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR--MEEAMKVFVEMERYECEADVV 358

  Fly   332 SFNAMLRCARDCGFGDLDSMREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVA 396
            ::.|::  :..|.:|.:|....|:|.:            ::||             .:|
plant   359 TYTALV--SGFCKWGKIDKCYIVLDDM------------IKKG-------------LMP------ 390

  Fly   397 TTASELELPNLLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEV 461
               |||...::::                .||:..........:|.|:|....|||..:..::.:
plant   391 ---SELTYMHIMV----------------AHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRL 436

  Fly   462 IPPTNAAEK--QLLTFVRKIGLKADIDFFNILIKKRSMRFDYESAKEVLLMIRTAGLRPDIVTYG 524
            .......::  :|...:.:.||...:|.|.|:|...:.:.....|.:....:.|.||. .:..||
plant   437 ACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF-SVSQYG 500

  Fly   525 VLAL------------------GCRTQEEARELLEQMHVAGIKMNMPI-LGAMLRQGCANKSFSY 570
            .|.|                  .|.|.:.|.||    :|    ::..| :.|:..:|...::.||
plant   501 TLKLLLNTVLKDKKLEMAKDVWSCITSKGACEL----NV----LSWTIWIHALFSKGYEKEACSY 557

  Fly   571 VNEIIQL----------SLEEGLKP--NEAFLRHLHNFHRGCARAIDARHPSTKTAAFKKGHSKF 623
            ..|:|::          .|.:|||.  |..|...:....|..|        :.:..:||
plant   558 CIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNMA--------AEREMSFK------ 608

  Fly   624 CDKYRLYYEEQGLSGL-----KLEDAIAKVKER 651
                  .|:.:|:..|     ..:|...|.|:|
plant   609 ------MYKRRGVQDLTEKAKSKQDREGKKKQR 635

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	9/38 (24%)
		PPR_2	182..231	CDD:289786	15/48 (31%)
		PPR	185..215	CDD:279828	9/29 (31%)
		PPR repeat	186..213	CDD:276811	7/26 (27%)
		PPR repeat	219..252	CDD:276811	6/32 (19%)
		PPR_1	252..284	CDD:289614	9/31 (29%)
		PPR_2	256..304	CDD:289786	15/47 (32%)
		PPR repeat	258..287	CDD:276811	7/28 (25%)
		PPR repeat	293..324	CDD:276811	6/30 (20%)
		PPR repeat	330..357	CDD:276811	5/26 (19%)
		PPR repeat	485..514	CDD:276811	5/28 (18%)
		PPR repeat	552..576	CDD:276811	6/24 (25%)
AT5G65820	NP_201383.1	PPR repeat	149..176	CDD:276811	6/46 (13%)
		PPR repeat	185..212	CDD:276811	6/44 (14%)
		PPR_2	188..230	CDD:289786	9/59 (15%)
		PPR_1	213..245	CDD:289614	8/31 (26%)
		PPR_2	216..264	CDD:289786	15/48 (31%)
		PPR repeat	220..246	CDD:276811	6/25 (24%)
		PPR repeat	255..281	CDD:276811	6/29 (21%)
		PPR_1	282..314	CDD:289614	9/31 (29%)
		PPR_2	285..334	CDD:289786	15/48 (31%)
		PPR repeat	289..316	CDD:276811	7/26 (27%)
		PPR_1	316..349	CDD:289614	8/34 (24%)
		PPR_2	320..369	CDD:289786	9/52 (17%)
		PPR repeat	322..351	CDD:276811	6/30 (20%)
		PPR_1	353..383	CDD:289614	7/31 (23%)
		PPR_2	356..395	CDD:289786	13/74 (18%)
		PPR repeat	357..386	CDD:276811	6/42 (14%)
		PPR repeat	392..420	CDD:276811	6/43 (14%)
		PPR_2	425..473	CDD:289786	10/47 (21%)
		PPR repeat	427..456	CDD:276811	2/28 (7%)
		PPR	429..462	CDD:273253	3/32 (9%)
		PPR repeat	462..491	CDD:276811	5/28 (18%)
		PPR repeat	496..528	CDD:276811	6/31 (19%)
		PPR repeat	535..564	CDD:276811	8/32 (25%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910