DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT5G39980

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_198814.1	Gene:	AT5G39980 / 833995	AraportID:	AT5G39980	Length:	678	Species:	Arabidopsis thaliana

Alignment Length:	570	Identity:	116/570 - (20%)
Similarity:	220/570 - (38%)	Gaps:	94/570 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly    74 REEVFEELITAAPKEHQKFKPEKKPKEKST----------KKVQ--DFGDPDTFGDAKVAATEDP 126
            |..:|....:::.:..|..|..:|..||:|          ::.|  .|.|.:...|..:|:....
plant    38 RNLIFTVSASSSSESTQNKKVWRKQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQT 102

  Fly   127 GDVEEEEFLSNSTRRSKKLKAVEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLI 191
            .: |:|.|...||.:.::| ::.:...:..  :.|....::|:|:. :.:|.:..|..:.||:::
plant   103 QN-EKELFSLLSTYKDRQL-SIRFMVSLLS--RENDWQRSLALLDW-VHEEAKYTPSVFAYNVVL 162

  Fly   192 SGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLAKAQ-----------IL 245
            ....:|.....|..|:.:||||.|.....||::|..:..........|:..|           :|
plant   163 RNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVL 227

  Fly   246 RENMLE--------------------KGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLE 290
            ..|::|                    .|..|::..||:||..||:......|.:|..||.|..:.
plant   228 YSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVL 292

  Fly   291 LNADTFNFLLQACASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLRCARDCGFGDLDSMREVI 355
            .|..:::.||.....|  |.|..||..:..|.:...:.|..:.|.|:..     :|.||.::|.
plant   293 PNTVSYSTLLSVYVEN--HKFLEALSVFAEMKEVNCALDLTTCNIMIDV-----YGQLDMVKEA- 349

  Fly   356 DKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVATTASELELPNLLLPQP------HL 414
            |::..|..:           .|..|:|.:..|.|....|.......:.|..|:..:.      ..
plant   350 DRLFWSLRK-----------MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 403

  Fly   415 GSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQLLTF--VR 477
            .:::.:...|..||:      .|..::.|:...|.|:..|::.::.:.......::....|  :|
plant   404 NTMIKIYGKTMEHEK------ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLR 462

  Fly   478 KIGLKADIDFFNILIKKRSMRFDYE------SAKEVLLMIRTAGLRPDIVTYGVLALGCRTQEEA 536
            ..|::.|...:..:|      ..||      .||.:|..::.....|......:||...|| |||
plant   463 SSGVEIDQVLYQTMI------VAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRT-EEA 520

  Fly   537 RELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVNEIIQLSLEEGLKPN 586
            ..:..|...:|...::.:.|.|:.....|:.:..|.|:.:.....|..|:
plant   521 TWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPD 570

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	7/38 (18%)
		PPR_2	182..231	CDD:289786	14/48 (29%)
		PPR	185..215	CDD:279828	9/29 (31%)
		PPR repeat	186..213	CDD:276811	7/26 (27%)
		PPR repeat	219..252	CDD:276811	8/63 (13%)
		PPR_1	252..284	CDD:289614	10/31 (32%)
		PPR_2	256..304	CDD:289786	15/47 (32%)
		PPR repeat	258..287	CDD:276811	10/28 (36%)
		PPR repeat	293..324	CDD:276811	8/30 (27%)
		PPR repeat	330..357	CDD:276811	6/26 (23%)
		PPR repeat	485..514	CDD:276811	6/34 (18%)
		PPR repeat	552..576	CDD:276811	5/23 (22%)
AT5G39980	NP_198814.1	PPR repeat	125..149	CDD:276811	3/26 (12%)
		PPR repeat	155..184	CDD:276811	7/28 (25%)
		PLN03077	<174..672	CDD:215561	89/429 (21%)
		PPR repeat	192..219	CDD:276811	5/26 (19%)
		PPR repeat	227..254	CDD:276811	3/26 (12%)
		PPR repeat	262..289	CDD:276811	10/26 (38%)
		PPR repeat	295..324	CDD:276811	8/30 (27%)
		PPR repeat	330..359	CDD:276811	8/45 (18%)
		PPR repeat	367..394	CDD:276811	5/26 (19%)
		PPR repeat	400..429	CDD:276811	5/34 (15%)
		PPR repeat	435..464	CDD:276811	3/28 (11%)
		PPR repeat	470..497	CDD:276811	6/32 (19%)
		PPR repeat	508..530	CDD:276811	8/22 (36%)
		PPR repeat	538..565	CDD:276811	5/26 (19%)
		PPR repeat	571..600	CDD:276811	116/570 (20%)
		PPR repeat	607..635	CDD:276811
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	104	1.000	Inparanoid score	I2129
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.050