DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT5G16640

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_197167.1	Gene:	AT5G16640 / 831526	AraportID:	AT5G16640	Length:	504	Species:	Arabidopsis thaliana

Alignment Length:	471	Identity:	100/471 - (21%)
Similarity:	174/471 - (36%)	Gaps:	118/471 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   134 FLSNSTRRSKKLKAVEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAG 198
            ||....:...:...|.:...:....:.:|:.:|:.:.:|  :.....||:..|||.:|.|..|:.
plant   138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ--MVGMGYKPNVVIYNTIIDGLCKSK 200

  Fly   199 YTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENMLEKGYEPNVKNYNA 263
            ....|..|..:|.:.|:.....||.||.:...::...||    |..:...|.::...|:|..:||
plant   201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD----ATRMVSCMTKREIYPDVFTFNA 261

  Fly   264 MIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLLQACASNSE-------HGFRHALLTWHNM 321
            :|.|..:.|.|..|....:||:.|.|:.:..|::.|:......|.       .||         |
plant   262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF---------M 317

  Fly   322 LQRGISPDYYSFNAMLRCARDCGFGDLDSMREVIDKIAPSAARKKPV-----LQLEKGQQDDLPS 381
            :.:|..||..:::.::.     |:                 .:.|.|     |..|..|:    .
plant   318 VSKGCFPDVVTYSILIN-----GY-----------------CKSKKVEHGMKLFCEMSQR----G 356

  Fly   382 VEANTTTLPAQIEVATTASELELPNLLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQH 446
            |..||.|....|:....|               |.|...||:.|   |.:..|
plant   357 VVRNTVTYTILIQGYCRA---------------GKLNVAEEIFR---RMVFCG------------ 391

  Fly   447 NITPDIETFTAMLEVIPPTNAAEKQL--LTFVRKIGLKADIDFFNILIKKRSMRFDYESAKEVLL 509
             :.|:|.|:..:|..:......||.|  |..::|.|:.|||..:||:|:......:...|.::..
plant   392 -VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455

  Fly   510 MIRTAGLRPDIVTYGVLALGCRTQEEARELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVNEI 574
            .:...||.|||.||..:.||             ::..|::.....|...::
plant   456 SLNCQGLMPDIWTYTTMMLG-------------LYKKGLRREADALFRKMK-------------- 493

  Fly   575 IQLSLEEGLKPNEAFL 590
                 |:|:.|||.::
plant   494 -----EDGILPNECYV 504

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	10/38 (26%)
		PPR_2	182..231	CDD:289786	15/48 (31%)
		PPR	185..215	CDD:279828	9/29 (31%)
		PPR repeat	186..213	CDD:276811	9/26 (35%)
		PPR repeat	219..252	CDD:276811	8/32 (25%)
		PPR_1	252..284	CDD:289614	9/31 (29%)
		PPR_2	256..304	CDD:289786	15/47 (32%)
		PPR repeat	258..287	CDD:276811	10/28 (36%)
		PPR repeat	293..324	CDD:276811	6/37 (16%)
		PPR repeat	330..357	CDD:276811	1/26 (4%)
		PPR repeat	485..514	CDD:276811	5/28 (18%)
		PPR repeat	552..576	CDD:276811	1/23 (4%)
AT5G16640	NP_197167.1	PPR_2	79..128	CDD:404055
		PPR repeat	84..110	CDD:276811
		PPR_2	115..163	CDD:404055	3/24 (13%)
		PPR repeat	118..145	CDD:276811	2/6 (33%)
		PLN03218	<144..>500	CDD:215636	95/459 (21%)
		PPR repeat	153..180	CDD:276811	3/28 (11%)
		PPR repeat	188..215	CDD:276811	9/26 (35%)
		PPR repeat	221..250	CDD:276811	8/32 (25%)
		PPR repeat	256..285	CDD:276811	10/28 (36%)
		PPR repeat	293..320	CDD:276811	6/35 (17%)
		PPR repeat	328..355	CDD:276811	5/48 (10%)
		PPR repeat	361..390	CDD:276811	10/46 (22%)
		PPR repeat	396..425	CDD:276811	7/28 (25%)
		PPR repeat	431..457	CDD:276811	5/25 (20%)
		PPR repeat	466..495	CDD:276811	7/60 (12%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	104	1.000	Inparanoid score	I2129
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.960