DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT5G15280

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_197032.1	Gene:	AT5G15280 / 831380	AraportID:	AT5G15280	Length:	1227	Species:	Arabidopsis thaliana

Alignment Length:	863	Identity:	157/863 - (18%)
Similarity:	278/863 - (32%)	Gaps:	316/863 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 GLQLNATGRRLNSYNISRLVIL----------PATWSCSQ---NRLLHVRITDQQAGL-----ET 62
            |:..:..|:.::.::..:.|:|          |.| ||.|   ::|:.|..|:....:     ||
plant   184 GIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLT-SCYQILIDQLVRVHRTESAYRICLDWVET 247

  Fly    63 KREANRNQNPFREEVFEELITAAPKEHQKFKPEKKPKEK------------------STKKVQDF 109
            :.|.|........:|.|.|..     .||.:..:....|                  ...:.|||
plant   248 RAELNHMNIDSIGKVIELLCL-----DQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDF 307

  Fly   110 GDPDTF-GDAKVAATEDPGDVEEEEFLSNSTRRSKKLKAVEYARQIKDHLKANR----------- 162
            .|..:| |:.|.    :|........|.:..||....:|..|..:: :||...:
plant   308 EDLLSFIGEVKY----EPDVFVGNRILHSLCRRFGSERAYVYMEEL-EHLGFKQDEVTFGILIGW 367

  Fly   163 ------LNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGT 221
                  :..|:..|.:.|.|  ..|||.|.||.::||..:.|..:....:..:|::.|:.::..|
plant   368 CCYEGDIKRAVLYLSEIMSK--GYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLST 430

  Fly   222 Y--------------------TSLFN-ACANAPSVSDGLAKA-----------QILREN------ 248
            :                    ..:|. ....|..|.|.|::|           ::.|:|
plant   431 FKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSK 495

  Fly   249 -----MLEKG---------YEPNVK---------NYNAMIKAYGRCGDVDTAYMLADEM------ 284
                 .|..|         ||..|.         .:|::|......||:.||..|.|||
plant   496 AEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMARWGQK 560

  Fly   285 --------MERQL----------------------ELNADTFNFLLQA-CASNSEHGF-RHALLT 317
                    :.|.|                      :|:.:|.|||:|. |    :.|| ||:.|.
plant   561 LSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYC----KKGFSRHSKLI 621

  Fly   318 WHNMLQRGISPDYYSFNAMLRC-------------------------ARDCG--------FGDLD 349
            :|.|:|.....|..::.:::||                         ..|||        .|.::
plant   622 FHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVE 686

  Fly   350 SMREVIDKIAPS-------AAR----KKPVLQLEKGQQDDLPSVEANTTTLPAQI---------- 393
            .:.::.:::..|       |.|    |..||.........:..:|.....:..::
plant   687 EVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCT 751

  Fly   394 EVATTASELELPNLLLPQ--PHLGSLVAL-----------------EEVTRPHERFLLLGGLT-- 437
            |...:|:...|..:|..:  |.|||.:.|                 |::...:..:.|:.||:
plant   752 EKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLA 816

  Fly   438 ----------------GFLEHMKQHNIT----------PDIETFTAML---EVIPPTNAAEKQLL 473
                            |...:.|.:|:.          ..:|....::   .:|    .:.|...
plant   817 GKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNII----CSVKSYR 877

  Fly   474 TFVRK----------IGLK----------ADIDFFNILIKKRSMRFDYESAKEVLLMIRTAGLRP 518
            .:|||          |.||          ..:..:|:||.......::....:|||.::..|:.|
plant   878 EYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLP 942

  Fly   519 DIVTYGVLALGCRTQEE---ARELLEQMHVAGIKMNMPILGAMLRQGCAN--------------- 565
            |..|:..|..|..:..:   :...|..|...|:|.|...|.|:....|.|
plant   943 DETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMES 1007

  Fly   566 KSFSYVNEIIQLSLEEGL 583
            |.::..:.::|..:.|.|
plant  1008 KGWNLGSSVVQTKIVETL 1025

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	14/55 (25%)
		PPR_2	182..231	CDD:289786	12/69 (17%)
		PPR	185..215	CDD:279828	7/29 (24%)
		PPR repeat	186..213	CDD:276811	6/26 (23%)
		PPR repeat	219..252	CDD:276811	10/75 (13%)
		PPR_1	252..284	CDD:289614	12/49 (24%)
		PPR_2	256..304	CDD:289786	19/93 (20%)
		PPR repeat	258..287	CDD:276811	11/51 (22%)
		PPR repeat	293..324	CDD:276811	13/32 (41%)
		PPR repeat	330..357	CDD:276811	6/59 (10%)
		PPR repeat	485..514	CDD:276811	6/28 (21%)
		PPR repeat	552..576	CDD:276811	5/38 (13%)
AT5G15280	NP_197032.1	PPR repeat	152..176	CDD:276811
		PPR repeat	183..212	CDD:276811	4/27 (15%)
		PPR_2	321..369	CDD:289786	8/48 (17%)
		PPR repeat	327..352	CDD:276811	5/25 (20%)
		PPR_2	357..405	CDD:289786	12/49 (24%)
		PPR repeat	360..387	CDD:276811	3/26 (12%)
		PPR	387..420	CDD:295754	10/34 (29%)
		PPR_2	391..440	CDD:289786	11/48 (23%)
		PPR repeat	393..422	CDD:276811	7/28 (25%)
		PPR repeat	428..454	CDD:276811	1/25 (4%)
		PPR_2	531..574	CDD:289786	11/42 (26%)
		PPR repeat	531..557	CDD:276811	10/25 (40%)
		PPR repeat	565..593	CDD:276811	2/27 (7%)
		PPR repeat	599..628	CDD:276811	13/32 (41%)
		PPR_2	601..646	CDD:289786	17/48 (35%)
		PPR repeat	741..768	CDD:276811	4/26 (15%)
		PPR_2	742..786	CDD:289786	9/43 (21%)
		PPR repeat	774..832	CDD:276811	8/57 (14%)
		PPR repeat	838..867	CDD:276811	3/28 (11%)
		PPR	840..873	CDD:273253	3/36 (8%)
		PPR repeat	873..897	CDD:276811	6/23 (26%)
		PPR_2	909..953	CDD:289786	11/43 (26%)
		PPR repeat	911..938	CDD:276811	6/26 (23%)
		PPR repeat	944..973	CDD:276811	5/28 (18%)
		PPR repeat	979..1008	CDD:276811	4/28 (14%)
		PPR repeat	1051..1077	CDD:276811
		PPR_2	1081..1129	CDD:289786
		PPR repeat	1083..1112	CDD:276811
		PPR	1085..1118	CDD:273253
		PPR repeat	1118..1145	CDD:276811
		PPR repeat	1153..1181	CDD:276811
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000