DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and AT5G14770

DIOPT Version :9

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_001318562.1 Gene:AT5G14770 / 831329 AraportID:AT5G14770 Length:940 Species:Arabidopsis thaliana


Alignment Length:583 Identity:134/583 - (22%)
Similarity:229/583 - (39%) Gaps:119/583 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 GDVEEEEF-LSNSTRRSKKLKAVEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLL 190
            ||:...|| ::....:|.....|.|:..|..::|...|.||:::|  |.:::....|:.:.|..:
plant   380 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL--RKMEDQNVVPNGFTYGTV 442

  Fly   191 ISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSD--GLAKAQILRENMLEKG 253
            |.|..|||....|..|..:||..|::.......:|.|.......:.:  ||.|      :|:.||
plant   443 IDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK------DMVSKG 501

  Fly   254 YEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLLQACASNSEHGFRHALLTW 318
            ...:..||.::|..:.:.||.:.|...|:||.||.:..:..::|.|:.......:.|   |...:
plant   502 VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG---ADWAY 563

  Fly   319 HNMLQRGISPDYYSFNAMLRCARDCGFGDLDSMREVIDK-----IAPSAARKKPVLQL--EKGQQ 376
            ..|.::||.||..:||.|:...|.  .||.:.:.::.||     |.||......|:.:  |.|:.
plant   564 KGMREKGIEPDIATFNIMMNSQRK--QGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKM 626

  Fly   377 DD---------LPSVEANTTTLPAQIEVATTASELELPNLLLPQPHLGSLVALEEVTRPHERFLL 432
            ::         |..:..|.||....::.::....                  .:.:.:.||..|.
plant   627 EEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR------------------ADAIFKTHETLLS 673

  Fly   433 LG------------------GLTG----FLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQLLTF 475
            .|                  |:|.    .:..|:.....||..||.:::......:...|.|.|:
plant   674 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY 738

  Fly   476 --VRKIGLKADIDFFNILIKKRSMRFDYESAKEV---LLMIRTAGLRPDIVTYGVLALGCRTQEE 535
              :.:.|:..::..:|.:|:..|   |....|||   |..:::.|:|||..||..|..|      
plant   739 SVMMEAGISPNVATYNTIIRGLS---DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG------ 794

  Fly   536 ARELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVNEIIQLSLEEG--LKPNEAFLRHLHNFHR 598
                  |..:..:|.:|.|...|:..|...|:.:| |.:|......|  |:..| .|:.:..  |
plant   795 ------QAKIGNMKGSMTIYCEMIADGLVPKTSTY-NVLISEFANVGKMLQARE-LLKEMGK--R 849

  Fly   599 GCARAIDARHPSTKT-AAFKKGHSKFC-------DKYRLYYEEQGLSGLKLEDAIAKVKERPY 653
            |.:       |:|.| .....|..|.|       :|..:|..|  ..||..|    .|:|:.|
plant   850 GVS-------PNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAE--AKGLLKE----MVEEKGY 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PPR_2 <157..196 CDD:289786 10/38 (26%)
PPR_2 182..231 CDD:289786 14/48 (29%)
PPR 185..215 CDD:279828 10/29 (34%)
PPR repeat 186..213 CDD:276811 10/26 (38%)
PPR repeat 219..252 CDD:276811 6/34 (18%)
PPR_1 252..284 CDD:289614 9/31 (29%)
PPR_2 256..304 CDD:289786 13/47 (28%)
PPR repeat 258..287 CDD:276811 9/28 (32%)
PPR repeat 293..324 CDD:276811 5/30 (17%)
PPR repeat 330..357 CDD:276811 6/26 (23%)
PPR repeat 485..514 CDD:276811 8/31 (26%)
PPR repeat 552..576 CDD:276811 7/23 (30%)
AT5G14770NP_001318562.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 104 1.000 Inparanoid score I2129
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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