DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG4611 and AT5G14080

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_196912.2	Gene:	AT5G14080 / 831257	AraportID:	AT5G14080	Length:	634	Species:	Arabidopsis thaliana

Alignment Length:	639	Identity:	121/639 - (18%)
Similarity:	234/639 - (36%)	Gaps:	143/639 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   120 VAATEDPGDVEEEEFLSNSTRRSKKLKAVEYARQ----IKDHLKANRLNEAIAVLEQ-------- 172
            ||...||       ||.|  ..|..|....:|.|    ..|.:..:.:.:::::..|
plant    50 VARVIDP-------FLLN--HHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALF 105

  Fly   173 RMLKEDRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSD 237
            :.:|.::...|..:|..||.........:.||::..:....|.::.......|.     |...||
plant   106 KQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLL-----AGLTSD 165

  Fly   238 GLAK-AQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLL- 300
            |... ||.|...|..||...|...:...|..:.|..:.:....|.||:.:..|.:|......|:
plant   166 GCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLIL 230

  Fly   301 -QACASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLRCARDCGF---GDLDSMREVIDK---- 357
             ..|..:.|....:.|....|:   ...||:.::..:..     .|   |:|...:.|:.|
plant   231 HSLCKCSREMDAFYILEELRNI---DCKPDFMAYRVIAE-----AFVVTGNLYERQVVLKKKRKL 287

  Fly   358 -IAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVATTASELELPNLLLPQPHLGSLVALE 421
             :||.::..:..:         |..:.|...|...::.....:.:..:.|.:| ...:||:.|::
plant   288 GVAPRSSDYRAFI---------LDLISAKRLTEAKEVAEVIVSGKFPMDNDIL-DALIGSVSAVD 342

  Fly   422 EVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQLLTF--VRKIGLKAD 484
            .           .....||.:|......|.|.|.:.:.:.:...:.::..:..:  :...|..::
plant   343 P-----------DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSE 396

  Fly   485 IDFFNILI----KKRSMRFDYESAKEVLLMIRTAGLRPDIVTYGVLALGCRTQE---EARELLEQ 542
            :..::::|    |...:|..|.:.:|    ::..||.||:..|..|...|...|   .|::|.::
plant   397 LQSYSLMISFLCKAGRVRESYTALQE----MKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDE 457

  Fly   543 MHVAGIKMNMPILGAMLR----QGCANKSFSYVNEIIQLSLEEGLKPNEAFLRHLHNFHRGCARA 603
            |.|.|.|||:.....::|    :|.|.:|....:::    ||.|::|:|.....|
plant   458 MFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKM----LERGIEPDETIYMSL---------- 508

  Fly   604 IDARHPSTKTAA----FKK----GHS----KFCDKYRLYYEEQGLSGLKLEDAIAKVKERPYDQF 656
            |:.....||..|    |:|    .|.    :...::.|.....|.||    :|...::||
plant   509 IEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSG----EASQLLRER----- 564

  Fly   657 KLPPVNGMEPLKH--------------EQLKHKTKQRKYIKKIK---IHELKDD 693
                    |.|:|              ::::...:..::||::.   :|.:..|
plant   565 --------EHLEHTGAHVVLLKCVADAKEVEIGIRHMQWIKEVSPSLVHTISSD 610

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	6/46 (13%)
		PPR_2	182..231	CDD:289786	8/48 (17%)
		PPR	185..215	CDD:279828	5/29 (17%)
		PPR repeat	186..213	CDD:276811	5/26 (19%)
		PPR repeat	219..252	CDD:276811	9/33 (27%)
		PPR_1	252..284	CDD:289614	7/31 (23%)
		PPR_2	256..304	CDD:289786	9/49 (18%)
		PPR repeat	258..287	CDD:276811	5/28 (18%)
		PPR repeat	293..324	CDD:276811	5/32 (16%)
		PPR repeat	330..357	CDD:276811	4/29 (14%)
		PPR repeat	485..514	CDD:276811	5/32 (16%)
		PPR repeat	552..576	CDD:276811	4/27 (15%)
AT5G14080	NP_196912.2	PPR repeat	84..111	CDD:276811	2/26 (8%)
		PPR repeat	119..146	CDD:276811	5/26 (19%)
		PPR repeat	154..181	CDD:276811	9/31 (29%)
		PPR repeat	187..215	CDD:276811	5/27 (19%)
		PPR repeat	222..250	CDD:276811	4/27 (15%)
		PPR repeat	258..287	CDD:276811	5/33 (15%)
		PPR repeat	328..356	CDD:276811	8/39 (21%)
		PPR_2	399..444	CDD:289786	12/48 (25%)
		PPR	399..432	CDD:273253	8/36 (22%)
		PPR repeat	399..426	CDD:276811	5/30 (17%)
		PPR_1	426..458	CDD:289614	10/31 (32%)
		PPR_2	430..475	CDD:289786	14/44 (32%)
		PPR repeat	434..461	CDD:276811	7/26 (27%)
		PPR_2	466..514	CDD:289786	12/61 (20%)
		PPR repeat	467..496	CDD:276811	5/32 (16%)
		PPR	469..502	CDD:273253	8/36 (22%)
		PPR_1	496..530	CDD:289614	10/43 (23%)
		PPR repeat	502..531	CDD:276811	8/38 (21%)
		PPR repeat	535..563	CDD:276811	5/31 (16%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000