Sequence 1: | NP_647949.1 | Gene: | CG4611 / 38601 | FlyBaseID: | FBgn0035591 | Length: | 703 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_196258.1 | Gene: | AT5G06400 / 830528 | AraportID: | AT5G06400 | Length: | 1030 | Species: | Arabidopsis thaliana |
Alignment Length: | 378 | Identity: | 86/378 - (22%) |
---|---|---|---|
Similarity: | 139/378 - (36%) | Gaps: | 92/378 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 LQLNATG------RRLNSYNISRLVILPATWSCSQNRLLHVRITDQQAGLETKREANRNQNPFRE 75
Fly 76 EVFEELITAAPKEHQKFKPEKKPKEKSTKKVQDFGDPDTFGDAKVAATEDPGDVEEEEFLSNSTR 140
Fly 141 RSKKLKAVEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAGYTRKAFF 205
Fly 206 LYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENMLEK-----------GYEPNVK 259
Fly 260 NYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTF----NFLLQACASNSEHGFRHALLTWHN 320
Fly 321 MLQRGISPDYYSFNAMLRCARDCGFGDLDSMREVIDKIAPSAARKKPVLQLEK 373 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4611 | NP_647949.1 | PPR_2 | <157..196 | CDD:289786 | 9/38 (24%) |
PPR_2 | 182..231 | CDD:289786 | 13/48 (27%) | ||
PPR | 185..215 | CDD:279828 | 7/29 (24%) | ||
PPR repeat | 186..213 | CDD:276811 | 6/26 (23%) | ||
PPR repeat | 219..252 | CDD:276811 | 6/32 (19%) | ||
PPR_1 | 252..284 | CDD:289614 | 12/42 (29%) | ||
PPR_2 | 256..304 | CDD:289786 | 18/51 (35%) | ||
PPR repeat | 258..287 | CDD:276811 | 10/28 (36%) | ||
PPR repeat | 293..324 | CDD:276811 | 11/34 (32%) | ||
PPR repeat | 330..357 | CDD:276811 | 5/26 (19%) | ||
PPR repeat | 485..514 | CDD:276811 | |||
PPR repeat | 552..576 | CDD:276811 | |||
AT5G06400 | NP_196258.1 | PPR repeat | 191..218 | CDD:276811 | |
PPR_2 | 192..236 | CDD:289786 | |||
PPR_2 | 222..270 | CDD:289786 | |||
PPR repeat | 224..253 | CDD:276811 | |||
PPR | 225..259 | CDD:273253 | |||
PPR_2 | 258..306 | CDD:289786 | |||
PPR repeat | 259..288 | CDD:276811 | |||
PPR | 261..290 | CDD:273253 | |||
PPR repeat | 294..322 | CDD:276811 | |||
PPR_2 | 330..376 | CDD:289786 | |||
PPR repeat | 364..393 | CDD:276811 | |||
PPR_2 | 369..408 | CDD:289786 | |||
PPR_2 | 397..445 | CDD:289786 | |||
PPR repeat | 400..427 | CDD:276811 | |||
PPR_2 | 431..478 | CDD:289786 | |||
PPR | 435..468 | CDD:273253 | |||
PPR repeat | 435..462 | CDD:276811 | |||
PPR_2 | 466..515 | CDD:289786 | |||
PPR repeat | 468..497 | CDD:276811 | |||
PPR repeat | 503..529 | CDD:276811 | |||
PPR repeat | 538..566 | CDD:276811 | |||
PPR repeat | 680..707 | CDD:276811 | |||
PPR_2 | 715..759 | CDD:289786 | 9/41 (22%) | ||
PPR repeat | 715..742 | CDD:276811 | 4/20 (20%) | ||
PPR repeat | 748..779 | CDD:276811 | 11/45 (24%) | ||
PPR | 750..784 | CDD:273253 | 12/54 (22%) | ||
PPR_2 | 817..864 | CDD:289786 | 11/48 (23%) | ||
PPR repeat | 821..848 | CDD:276811 | 6/28 (21%) | ||
PPR_2 | 853..896 | CDD:289786 | 12/42 (29%) | ||
PPR repeat | 856..883 | CDD:276811 | 6/26 (23%) | ||
PPR_2 | 887..934 | CDD:289786 | 15/61 (25%) | ||
PPR repeat | 891..918 | CDD:276811 | 8/41 (20%) | ||
PPR_2 | 922..971 | CDD:289786 | 16/48 (33%) | ||
PPR repeat | 924..953 | CDD:276811 | 10/28 (36%) | ||
PPR | 925..958 | CDD:273253 | 11/32 (34%) | ||
PPR_2 | 957..1004 | CDD:289786 | 16/60 (27%) | ||
PPR repeat | 959..988 | CDD:276811 | 11/34 (32%) | ||
PPR | 961..994 | CDD:273253 | 14/38 (37%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |