Sequence 1: | NP_647949.1 | Gene: | CG4611 / 38601 | FlyBaseID: | FBgn0035591 | Length: | 703 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001329166.1 | Gene: | AT4G26800 / 828787 | AraportID: | AT4G26800 | Length: | 514 | Species: | Arabidopsis thaliana |
Alignment Length: | 399 | Identity: | 83/399 - (20%) |
---|---|---|---|
Similarity: | 151/399 - (37%) | Gaps: | 79/399 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 160 ANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTS 224
Fly 225 LFNACANAPSVSDGLAKAQILRENMLEKGYEPNVKNYNAMIKAY---GRCGDVDTAYMLADEMME 286
Fly 287 RQLELNADTFNFLLQA-CASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLRCARDCGFGDLDS 350
Fly 351 MREVIDKIAPSAARKKPVLQLEKGQQDDLP--SVEANTTTLPAQIEVATTASELELPNLLLPQPH 413
Fly 414 LGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQLLTFVRK 478
Fly 479 IGLKADIDF--FNILIKKRSMRFDYESAKEVLLMIRTAGLRPDIVTYGVL-----ALGCRTQEEA 536
Fly 537 RELLEQMHV 545 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4611 | NP_647949.1 | PPR_2 | <157..196 | CDD:289786 | 8/35 (23%) |
PPR_2 | 182..231 | CDD:289786 | 12/48 (25%) | ||
PPR | 185..215 | CDD:279828 | 6/29 (21%) | ||
PPR repeat | 186..213 | CDD:276811 | 5/26 (19%) | ||
PPR repeat | 219..252 | CDD:276811 | 9/32 (28%) | ||
PPR_1 | 252..284 | CDD:289614 | 12/34 (35%) | ||
PPR_2 | 256..304 | CDD:289786 | 15/51 (29%) | ||
PPR repeat | 258..287 | CDD:276811 | 10/31 (32%) | ||
PPR repeat | 293..324 | CDD:276811 | 6/31 (19%) | ||
PPR repeat | 330..357 | CDD:276811 | 3/26 (12%) | ||
PPR repeat | 485..514 | CDD:276811 | 4/30 (13%) | ||
PPR repeat | 552..576 | CDD:276811 | |||
AT4G26800 | NP_001329166.1 | PPR_2 | 83..135 | CDD:404055 | |
PPR repeat | 88..114 | CDD:276811 | |||
PLN03077 | <116..>492 | CDD:215561 | 79/386 (20%) | ||
PPR repeat | 123..152 | CDD:276811 | |||
PPR repeat | 160..187 | CDD:276811 | 4/17 (24%) | ||
PPR repeat | 195..222 | CDD:276811 | 5/26 (19%) | ||
PPR repeat | 230..257 | CDD:276811 | 9/30 (30%) | ||
PPR repeat | 263..292 | CDD:276811 | 10/31 (32%) | ||
PPR repeat | 298..327 | CDD:276811 | 6/31 (19%) | ||
PPR repeat | 333..362 | CDD:276811 | 6/51 (12%) | ||
PPR repeat | 368..397 | CDD:276811 | 8/59 (14%) | ||
PPR repeat | 403..431 | CDD:276811 | 6/27 (22%) | ||
PPR repeat | 438..465 | CDD:276811 | 3/26 (12%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |