DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT4G04370

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_192346.1	Gene:	AT4G04370 / 825757	AraportID:	AT4G04370	Length:	729	Species:	Arabidopsis thaliana

Alignment Length:	700	Identity:	124/700 - (17%)
Similarity:	229/700 - (32%)	Gaps:	246/700 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 ALRLISRSMSCHIRGLQLNATGRRLNSYNISRLVILPATWSCSQNRLLHVRITDQQAGLETKREA 66
            :|:.:|..:|.|   .|:...|...:.|..|.||.|.|.:..    |.|.|
plant    58 SLQRLSFGLSIH---QQVLVNGFSSDFYISSSLVNLYAKFGL----LAHAR-------------- 101

  Fly    67 NRNQNPFREEVFEELITAAPKEHQKFKPEKKPKEKS----TKKVQDFGDPDTFGDAKVAATE--- 124
                     :||||:                 :|:.    |..:..:......|:|.....|
plant   102 ---------KVFEEM-----------------RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRF 140

  Fly   125 ---DPGDVEEEEFLSNSTRRSKKLKAVEYA-------------RQIKDHLKANRLNEAIAVLEQR 173
               .||.|...|.||.....::.....::|             ..:..:.|.:.:.:|..:.:|
plant   141 QGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQ- 204

  Fly   174 MLKEDRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDG 238
              .|.|   |...:|.:|||.|..|...:...|..:||..||:....|    |.|..:.......
plant   205 --MEQR---DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT----FGASLSVSGTMCD 260

  Fly   239 LAKAQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLAD--------------------- 282
            |...::|...:::.|::.::....|:|..|.:||..:.:|.:.:
plant   261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325

  Fly   283 ----------EMMERQLELNADTFNFLLQACA-------SNSEHGFRHALLTWHNMLQRGISPDY 330
                      ||::...:|:::....::.:||       ..|.||:         :|:.|.:.|.
plant   326 RAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGY---------VLRHGYTLDT 381

  Fly   331 YSFNAMLRCARDCGF-------------GDLDSMREVIDKIAPSAARKKPVLQLEKGQQDDLPSV 382
            .:.|:::.....||.             .||.|...:|...|.:....|.:|..|:.:...:..|
plant   382 PALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQV 446

  Fly   383 EANTTTLPAQIEVATTASELELPNLLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHN 447
            :  :.|:.:.::..::|..|.:..|:                                     |.
plant   447 D--SFTVVSLLQACSSAGALPVGKLI-------------------------------------HC 472

  Fly   448 ITPDIETFTAMLEVIPPTNAAEKQLLTFVRKIGLKADIDFFNILIKKRSMRFDYESAKEVLLMIR 512
            |.  |.:|      |.|.:..:..|:....|.|          .::.....||..|.|
plant   473 IV--IRSF------IRPCSLVDTALVDMYSKCG----------YLEAAQRCFDSISWK------- 512

  Fly   513 TAGLRPDIVTYGVLALGCRTQ---EEARELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVNEI 574
                  |:|::|:|..|....   :.|.|:..:...:|::.|..|..|:| ..|::      |.:
plant   513 ------DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVL-SSCSH------NGM 564

  Fly   575 IQLSL--------EEGLKPN------------------EAFLRHLHNFHR 598
            :|..|        :.|::||                  :||..:..||.|
plant   565 VQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTR 614

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	10/38 (26%)
		PPR_2	182..231	CDD:289786	15/48 (31%)
		PPR	185..215	CDD:279828	9/29 (31%)
		PPR repeat	186..213	CDD:276811	9/26 (35%)
		PPR repeat	219..252	CDD:276811	5/32 (16%)
		PPR_1	252..284	CDD:289614	7/62 (11%)
		PPR_2	256..304	CDD:289786	9/78 (12%)
		PPR repeat	258..287	CDD:276811	8/59 (14%)
		PPR repeat	293..324	CDD:276811	6/37 (16%)
		PPR repeat	330..357	CDD:276811	7/39 (18%)
		PPR repeat	485..514	CDD:276811	4/28 (14%)
		PPR repeat	552..576	CDD:276811	5/23 (22%)
AT4G04370	NP_192346.1	PPR_2	14..57	CDD:289786
		PPR repeat	14..40	CDD:276811
		PPR repeat	46..75	CDD:276811	5/19 (26%)
		PPR repeat	85..110	CDD:276811	12/68 (18%)
		PPR_2	86..124	CDD:289786	13/81 (16%)
		PPR	113..145	CDD:273253	4/31 (13%)
		PPR repeat	114..141	CDD:276811	4/26 (15%)
		PPR repeat	147..208	CDD:276811	9/63 (14%)
		PPR_2	178..221	CDD:289786	10/48 (21%)
		PPR_2	209..248	CDD:289786	13/42 (31%)
		PPR repeat	210..237	CDD:276811	7/26 (27%)
		PPR	211..241	CDD:279828	9/29 (31%)
		PPR repeat	245..309	CDD:276811	12/67 (18%)
		PPR	312..341	CDD:279828	2/28 (7%)
		PPR repeat	313..375	CDD:276811	9/70 (13%)
		PPR repeat	381..410	CDD:276811	3/28 (11%)
		PPR_2	385..424	CDD:289786	7/38 (18%)
		PPR_2	411..458	CDD:289786	10/48 (21%)
		PPR repeat	412..439	CDD:276811	7/26 (27%)
		PPR	413..439	CDD:279828	6/25 (24%)
		PPR repeat	487..512	CDD:276811	6/34 (18%)
		PPR_2	512..561	CDD:289786	14/62 (23%)
		PPR repeat	516..543	CDD:276811	5/26 (19%)
		PPR repeat	549..578	CDD:276811	7/35 (20%)
		PPR repeat	585..610	CDD:276811	2/24 (8%)
		PPR repeat	617..645	CDD:276811
		PPR repeat	651..679	CDD:276811
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000