DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT3G58590

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_191418.2	Gene:	AT3G58590 / 825028	AraportID:	AT3G58590	Length:	741	Species:	Arabidopsis thaliana

Alignment Length:	561	Identity:	121/561 - (21%)
Similarity:	205/561 - (36%)	Gaps:	135/561 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   145 LKAVEYARQIKDHLKANR---------LNEAIAV--------LEQRMLKEDRAKPDKYIYNLLIS 192
            :|.::.::|:  |..|.:         :|..|:.        :.:||. :|....|...:|.:|.
plant   228 VKDLDISKQL--HCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMF-QDAGSWDIVSWNAIIC 289

  Fly   193 GCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENMLEKGYEPN 257
            ..||:....||..|:..|.:.|.....|||.|:....:....:|.|    :.:...:::.|.|..
plant   290 ATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG----RQIHGMLIKNGCETG 350

  Fly   258 VKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLLQACASNSEHGFRHALLTWHNML 322
            :...||:|..|.:||:::.:.:..|.:.::    |...:|.||...| |.:...  .|..:..||
plant   351 IVLGNALIDFYAKCGNLEDSRLCFDYIRDK----NIVCWNALLSGYA-NKDGPI--CLSLFLQML 408

  Fly   323 QRGISPDYYSFNAMLRCARDCGFGDLDSMREVI--------DKIAPSAARKKPVLQLEKGQQDDL 379
            |.|..|..|:|:..|   :.|...:|..:..||        |.:..|..|.....||.......|
plant   409 QMGFRPTEYTFSTAL---KSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLL 470

  Fly   380 PSVEANTTTLPAQI------------EVATTASELELPNLLLPQPHLGSLVALEEVTRP--HERF 430
            ......|:.:|..|            |.....|.||.|:.      :...:|:...:|.  ||..
plant   471 DWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDT------VSWNIAIAACSRSDYHEEV 529

  Fly   431 LLLGGLTGFLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQLLTFVRKIGLKADI---DFF--NI 490
            :.|      .:||.|.||.||..||.::|.:.  :...:..|.:.:..:..|.|.   |.|  |:
plant   530 IEL------FKHMLQSNIRPDKYTFVSILSLC--SKLCDLTLGSSIHGLITKTDFSCADTFVCNV 586

  Fly   491 LIKK-------RSMRFDYESAKEVLLMIRTA------------------------GLRPDIVTYG 524
            ||..       ||:...:|..:|..|:..||                        |.:||.|::.
plant   587 LIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFI 651

  Fly   525 VLALGCR---TQEEARELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVNEIIQLSLEEG-LKP 585
            .:...||   ..:|...|.::|...|::..|.      ...||          :.|....| ||.
plant   652 SILTACRHGGMVKEGMGLFQKMKDYGVEPEMD------HYRCA----------VDLLARNGYLKE 700

  Fly   586 NEAFLRHL---------HNFHRGCARAIDARHPSTKTAAFK 617
            .|..:|.:         ..|..||.|..:.:..:....:|:
plant   701 AEHLIREMPFPADAPVWRTFLDGCNRFAEEQRNTLNVVSFQ 741

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	10/55 (18%)
		PPR_2	182..231	CDD:289786	14/48 (29%)
		PPR	185..215	CDD:279828	8/29 (28%)
		PPR repeat	186..213	CDD:276811	8/26 (31%)
		PPR repeat	219..252	CDD:276811	6/32 (19%)
		PPR_1	252..284	CDD:289614	9/31 (29%)
		PPR_2	256..304	CDD:289786	11/47 (23%)
		PPR repeat	258..287	CDD:276811	7/28 (25%)
		PPR repeat	293..324	CDD:276811	8/30 (27%)
		PPR repeat	330..357	CDD:276811	7/34 (21%)
		PPR repeat	485..514	CDD:276811	10/40 (25%)
		PPR repeat	552..576	CDD:276811	3/23 (13%)
AT3G58590	NP_191418.2	PPR_2	49..92	CDD:289786
		PPR repeat	51..78	CDD:276811
		PPR_1	74..107	CDD:289614
		PPR repeat	80..109	CDD:276811
		PPR_2	81..124	CDD:289786
		PPR repeat	115..175	CDD:276811
		PPR repeat	182..209	CDD:276811
		PPR repeat	254..278	CDD:276811	5/24 (21%)
		PPR repeat	281..310	CDD:276811	8/28 (29%)
		PPR	282..315	CDD:273253	9/32 (28%)
		PPR repeat	316..380	CDD:276811	15/67 (22%)
		PPR_2	380..427	CDD:289786	15/56 (27%)
		PPR repeat	384..410	CDD:276811	8/28 (29%)
		PPR repeat	416..441	CDD:276811	7/27 (26%)
		PPR repeat	447..471	CDD:276811	5/23 (22%)
		PPR repeat	479..507	CDD:276811	5/27 (19%)
		PPR_2	508..557	CDD:289786	16/62 (26%)
		PPR	511..544	CDD:273253	10/38 (26%)
		PPR repeat	512..539	CDD:276811	7/32 (22%)
		PPR repeat	545..574	CDD:276811	4/30 (13%)
		PPR_2	580..622	CDD:289786	12/41 (29%)
		PPR repeat	583..610	CDD:276811	6/26 (23%)
		PPR_2	610..657	CDD:289786	7/46 (15%)
		PPR repeat	614..641	CDD:276811	2/26 (8%)
		PPR repeat	647..676	CDD:276811	6/28 (21%)
		PPR repeat	682..708	CDD:276811	9/41 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000