DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT3G47530

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_190337.1	Gene:	AT3G47530 / 823907	AraportID:	AT3G47530	Length:	591	Species:	Arabidopsis thaliana

Alignment Length:	372	Identity:	84/372 - (22%)
Similarity:	132/372 - (35%)	Gaps:	81/372 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MALRLISRSM--SCHIRGLQLNATGRRLNSYNISRLVILPATWSCSQNRLLHVRITDQQAGLETK 63
            :||.||.|.:  ||.:...:||.|....|:  :.|...|..| .|...||..          ..:
plant    53 LALSLIPRDINYSCRVFSQRLNPTLSHCNT--MIRAFSLSQT-PCEGFRLFR----------SLR 104

  Fly    64 REANRNQNPFREEVFEELITAAPKEHQKFKPEKKPKEKSTKKVQDFGDPDTFGDAKVAATEDPGD 128
            |.::...||.....                        :.|.....|  |..|..::     .|.
plant   105 RNSSLPANPLSSSF------------------------ALKCCIKSG--DLLGGLQI-----HGK 138

  Fly   129 VEEEEFLSNSTRRSKKLKAVEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISG 193
            :..:.|||:|...:..:..........|..|               :.::..|.|...:|:|.|.
plant   139 IFSDGFLSDSLLMTTLMDLYSTCENSTDACK---------------VFDEIPKRDTVSWNVLFSC 188

  Fly   194 CAKAGYTRKAFFLYTKMR---QRGLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENMLEKGYE 255
            ..:...||....|:.||:   ...::..|.|......||||..::..|......:.||    |..
plant   189 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN----GLS 249

  Fly   256 PNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLLQACASNSEHGF-RHALLTWH 319
            ..:...|.::..|.|||.:|.||.:...|.||    |..::..|:...|.|   || :.|:..::
plant   250 GALNLSNTLVSMYSRCGSMDKAYQVFYGMRER----NVVSWTALISGLAMN---GFGKEAIEAFN 307

  Fly   320 NMLQRGISPDYYSFNAMLRCARDCGF---GDL--DSMREVIDKIAPS 361
            .||:.||||:..:...:|......|.   |.:  |.||....||.|:
plant   308 EMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPN 354

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	6/38 (16%)
		PPR_2	182..231	CDD:289786	13/51 (25%)
		PPR	185..215	CDD:279828	8/32 (25%)
		PPR repeat	186..213	CDD:276811	8/29 (28%)
		PPR repeat	219..252	CDD:276811	9/32 (28%)
		PPR_1	252..284	CDD:289614	9/31 (29%)
		PPR_2	256..304	CDD:289786	13/47 (28%)
		PPR repeat	258..287	CDD:276811	9/28 (32%)
		PPR repeat	293..324	CDD:276811	8/31 (26%)
		PPR repeat	330..357	CDD:276811	6/31 (19%)
		PPR repeat	485..514	CDD:276811
		PPR repeat	552..576	CDD:276811
AT3G47530	NP_190337.1	PLN03077	<28..589	CDD:215561	84/372 (23%)
		PPR repeat	79..106	CDD:276811	7/39 (18%)
		PPR repeat	120..142	CDD:276811	5/28 (18%)
		PPR repeat	148..177	CDD:276811	3/43 (7%)
		PPR repeat	181..208	CDD:276811	8/26 (31%)
		PPR repeat	217..246	CDD:276811	7/28 (25%)
		PPR repeat	256..281	CDD:276811	9/24 (38%)
		PPR repeat	285..312	CDD:276811	8/29 (28%)
		PPR repeat	318..349	CDD:276811	6/30 (20%)
		PPR repeat	355..384	CDD:276811	84/372 (23%)
		PPR repeat	387..415	CDD:276811
		PPR repeat	420..450	CDD:276811
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000