DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT3G22670

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_188906.1	Gene:	AT3G22670 / 821838	AraportID:	AT3G22670	Length:	562	Species:	Arabidopsis thaliana

Alignment Length:	379	Identity:	76/379 - (20%)
Similarity:	139/379 - (36%)	Gaps:	93/379 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   137 NSTRRSKKLKAVEYARQIKDHLKANRLNEAI-AVLEQR------------------MLKE----- 177
            |....||.:.....::.::...|:.:.|:|: |.||..                  ::||
plant   193 NKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEH 257

  Fly   178 ---------DRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLFNA-CANA 232
                     |..|||...:|:||.|..||.....|..:...|:.........||||...| |...
plant   258 AHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEG 322

  Fly   233 PSVSDGLAKAQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFN 297
                 ...:...:.|.|.|.|..|||..|..::.:.|:...|..|..:.::|.|.....:|..::
plant   323 -----DFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYS 382

  Fly   298 FLLQACASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLRCARDCGFGDLDSMREVIDKIAPSA 362
            .|:...:....  |:.|...:.:|..:|:..|...:|.|:..|          :....|::|
plant   383 SLIHILSKTGR--FKDAAEIFEDMTNQGVRRDVLVYNTMISAA----------LHHSRDEMA--- 432

  Fly   363 ARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVATTASELELPNLLLPQPHLGSLVALEEVTRPH 427
                  |:|.|..:|:    |..:.:                       |::.:...|.::....
plant   433 ------LRLLKRMEDE----EGESCS-----------------------PNVETYAPLLKMCCHK 464

  Fly   428 ERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQLLTF---VRK 478
            ::..|||.|   |.||.:::::.|:.|:..::..:..:...|:..|.|   |||
plant   465 KKMKLLGIL---LHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRK 515

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	16/71 (23%)
		PPR_2	182..231	CDD:289786	16/49 (33%)
		PPR	185..215	CDD:279828	8/29 (28%)
		PPR repeat	186..213	CDD:276811	8/26 (31%)
		PPR repeat	219..252	CDD:276811	8/33 (24%)
		PPR_1	252..284	CDD:289614	8/31 (26%)
		PPR_2	256..304	CDD:289786	11/47 (23%)
		PPR repeat	258..287	CDD:276811	6/28 (21%)
		PPR repeat	293..324	CDD:276811	5/30 (17%)
		PPR repeat	330..357	CDD:276811	3/26 (12%)
		PPR repeat	485..514	CDD:276811
		PPR repeat	552..576	CDD:276811
AT3G22670	NP_188906.1	PPR	167..>192	CDD:273253
		PPR repeat	168..195	CDD:276811	1/1 (100%)
		PPR repeat	205..232	CDD:276811	6/26 (23%)
		PLN03218	<214..>558	CDD:215636	73/358 (20%)
		PPR repeat	241..268	CDD:276811	2/26 (8%)
		PPR repeat	275..302	CDD:276811	8/26 (31%)
		PPR repeat	308..337	CDD:276811	8/33 (24%)
		PPR repeat	343..372	CDD:276811	6/28 (21%)
		PPR repeat	378..404	CDD:276811	4/27 (15%)
		PPR repeat	413..442	CDD:276811	8/47 (17%)
		PPR repeat	486..515	CDD:276811	5/28 (18%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000