DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT3G16010

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_188222.1	Gene:	AT3G16010 / 820846	AraportID:	AT3G16010	Length:	642	Species:	Arabidopsis thaliana

Alignment Length:	430	Identity:	94/430 - (21%)
Similarity:	167/430 - (38%)	Gaps:	75/430 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly   148 VEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQ 212
            :.|:..|..:.|..|.:.||.:.::  :|::..:|.:.||..|:....|.|...||..|:.:|::
plant   234 ITYSALISSYEKLGRNDSAIRLFDE--MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR 296

  Fly   213 RGLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTA 277
            .|...|..|||.|......|..|.:    |....::||..|..|:|...|.::...|:.|.|:..
plant   297 AGCSPTVYTYTELIKGLGKAGRVDE----AYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357

  Fly   278 YMLADEMMERQLELNADTFNFLLQACASNSEHGFRHALLTWHNMLQR-GISPDYYSFNAMLRCAR 341
            ..:..||...:......::|.:::|...:..|  ...:.:|.:.::. .:||..::::.:
plant   358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAH--VSEVSSWFDKMKADSVSPSEFTYSIL----- 415

  Fly   342 DCGFGDLDSMREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVATTASELELPN 406
                         ||....:...:|.:|.||:..:...|...|...:|   |.....|...|..|
plant   416 -------------IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL---INALGKAKRYEAAN 464

  Fly   407 LLLPQ-----------------PHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIET 454
            .|..:                 .|.|....|.|.             ......||.....||:..
plant   465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA-------------VDLFNEMKNQGSGPDVYA 516

  Fly   455 FTAMLE------VIPPTNAAEKQLLTFVRKIGLKADIDFFNILIKKRSMRFDYESAKEVLLMIRT 513
            :.|::.      :|...|:    ||..:.:.|.:|||:..||::...:.......|.|:...|:.
plant   517 YNALMSGMVKAGMINEANS----LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKH 577

  Fly   514 AGLRPDIVTYGVLALGCRTQ----EEARELLEQMHVAGIK 549
            :|::||.|||..| |||...    |||..::.:|...|.:
plant   578 SGIKPDGVTYNTL-LGCFAHAGMFEEAARMMREMKDKGFE 616

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	9/38 (24%)
		PPR_2	182..231	CDD:289786	16/48 (33%)
		PPR	185..215	CDD:279828	9/29 (31%)
		PPR repeat	186..213	CDD:276811	9/26 (35%)
		PPR repeat	219..252	CDD:276811	9/32 (28%)
		PPR_1	252..284	CDD:289614	7/31 (23%)
		PPR_2	256..304	CDD:289786	10/47 (21%)
		PPR repeat	258..287	CDD:276811	7/28 (25%)
		PPR repeat	293..324	CDD:276811	4/30 (13%)
		PPR repeat	330..357	CDD:276811	1/26 (4%)
		PPR repeat	485..514	CDD:276811	6/28 (21%)
		PPR repeat	552..576	CDD:276811
AT3G16010	NP_188222.1	PPR_2	168..204	CDD:289786
		PPR repeat	168..191	CDD:276811
		PPR_2	195..243	CDD:289786	2/8 (25%)
		PPR repeat	199..226	CDD:276811
		PPR_1	229..260	CDD:289614	6/27 (22%)
		PPR repeat	235..262	CDD:276811	7/28 (25%)
		PPR_2	266..315	CDD:289786	16/48 (33%)
		PPR repeat	268..297	CDD:276811	9/28 (32%)
		PPR	270..303	CDD:273253	10/32 (31%)
		PPR_1	298..329	CDD:289614	9/34 (26%)
		PPR_2	301..>339	CDD:289786	12/41 (29%)
		PPR repeat	303..332	CDD:276811	9/32 (28%)
		PPR_2	336..383	CDD:289786	9/46 (20%)
		PPR repeat	338..364	CDD:276811	5/25 (20%)
		PPR_2	371..421	CDD:289786	8/69 (12%)
		PPR repeat	375..403	CDD:276811	4/29 (14%)
		PPR_1	405..435	CDD:289614	8/47 (17%)
		PPR_2	407..456	CDD:289786	11/69 (16%)
		PPR repeat	409..438	CDD:276811	6/46 (13%)
		PPR repeat	444..473	CDD:276811	7/31 (23%)
		PPR	480..514	CDD:273253	7/46 (15%)
		PPR_2	482..526	CDD:289786	9/56 (16%)
		PPR_2	512..561	CDD:289786	13/52 (25%)
		PPR	515..549	CDD:273253	7/37 (19%)
		PPR repeat	516..543	CDD:276811	5/30 (17%)
		PPR repeat	549..578	CDD:276811	6/28 (21%)
		PPR	551..583	CDD:273253	6/31 (19%)
		PPR_2	582..628	CDD:289786	14/36 (39%)
		PPR repeat	584..613	CDD:276811	11/29 (38%)
		PPR	585..619	CDD:273253	12/33 (36%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	104	1.000	Inparanoid score	I2129
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.050