DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and AT3G09060

DIOPT Version :10

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_187518.1 Gene:AT3G09060 / 820059 AraportID:AT3G09060 Length:687 Species:Arabidopsis thaliana


Alignment Length:679 Identity:128/679 - (18%)
Similarity:239/679 - (35%) Gaps:174/679 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RRLNS----YNISRLVILPATWSCSQNRLLHVRITDQQAGLETKREANRNQNP------FR--EE 76
            |||:.    .::||:|.|..:..|.         .|:...|...:...:|..|      |:  .|
plant    51 RRLSETRMVNHVSRIVELIRSQECK---------CDEDVALSVIKTYGKNSMPDQALDVFKRMRE 106

  Fly    77 VF---------EELITAAPKEHQKFKPEK-----------------------KPKEKSTKKVQDF 109
            :|         ..|:.|..:..|..|.|.                       ..|:|..:|.:.|
plant   107 IFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171

  Fly   110 GD--------PDTFGDAKVAATEDPGDVEEEEFLSNSTRRSKKLKAVEYARQIKDHLKANRLNEA 166
            .|        ||.|                                 .|:..|.|..||.:|::|
plant   172 LDWMWKEGFKPDVF---------------------------------SYSTVINDLAKAGKLDDA 203

  Fly   167 IAVLEQ----------------------------------RMLKEDRAKPDKYIYNLLISGCAKA 197
            :.:.::                                  |:|::....|:...:|::|||.:|.
plant   204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKC 268

  Fly   198 GYTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENMLEKGYEPNVKNYN 262
            |.......::.:|:|...:....||:||.:...:|.:|.    ||:.:...:.|:....:|..||
plant   269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVD----KAESVFNELDERKASIDVVTYN 329

  Fly   263 AMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLLQACASNSEHGFRHALLTWHNMLQRGIS 327
            .|:..:.|||.:..:..|. .:||.:..:|..::|.|::....|.:  ...|.:.|..|..:|.:
plant   330 TMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGK--IDEATMIWRLMPAKGYA 391

  Fly   328 PDYYSFNAMLR--CARDCGFGDLDSMREV------ID-----KIAPSAARKKPVLQLEKG----Q 375
            .|..::...:.  |........|..|:||      :|     .|.....:||   :||:.    :
plant   392 ADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK---RLEEASNLVK 453

  Fly   376 QDDLPSVEANTTTLPAQIEVATTASELELPNLLLPQPHLGSLVALEEVTRPHERFLLLGGL---- 436
            :.....||.|:....|.|......|.|...:..|.:  :|.......|...:   :|:.||    
plant   454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE--MGKNGCRPTVVSYN---ILICGLCKAG 513

  Fly   437 -----TGFLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQLLTFVR--KIGLKADIDFFNILIKK 494
                 :.|::.|.::...||::|::.:|..:......:..|..:.:  :.||:.|:...||||..
plant   514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578

  Fly   495 RSMRFDYESAKEVLLMIRTAGLRPDIVTYGVLALG---CRTQEEARELLEQMHVAGIKMNMPILG 556
            .......:.|..|:..:.......::|||..|..|   ......|..:...|:..|::.::....
plant   579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYN 643

  Fly   557 AMLRQGCANKSFSYVNEIIQLSLEEGLKP 585
            .:::..|..:..||..|....:...|:.|
plant   644 TIMKGLCMCRGVSYAMEFFDDARNHGIFP 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PLN03218 <166..>561 CDD:215636 88/459 (19%)
PPR repeat 186..213 CDD:276811 7/26 (27%)
PPR repeat 219..252 CDD:276811 8/32 (25%)
PPR repeat 258..287 CDD:276811 9/28 (32%)
PPR repeat 293..324 CDD:276811 6/30 (20%)
PPR repeat 330..357 CDD:276811 6/39 (15%)
PPR repeat 485..514 CDD:276811 6/28 (21%)
PPR repeat 552..576 CDD:276811 4/23 (17%)
AT3G09060NP_187518.1 PPR repeat 13..36 CDD:276811
PPR repeat 45..72 CDD:276811 7/20 (35%)
PPR_2 83..124 CDD:463778 6/40 (15%)
PPR repeat 83..108 CDD:276811 4/24 (17%)
PPR_2 112..161 CDD:463778 5/48 (10%)
PPR repeat 116..143 CDD:276811 5/26 (19%)
PLN03218 <147..>580 CDD:215636 92/480 (19%)
PPR repeat 151..178 CDD:276811 5/26 (19%)
PPR repeat 184..213 CDD:276811 8/61 (13%)
PPR repeat 219..248 CDD:276811 2/28 (7%)
PPR repeat 257..284 CDD:276811 7/26 (27%)
PPR repeat 290..319 CDD:276811 8/32 (25%)
PPR repeat 325..354 CDD:276811 10/29 (34%)
PPR repeat 359..388 CDD:276811 6/30 (20%)
PPR repeat 394..423 CDD:276811 5/28 (18%)
PPR repeat 431..458 CDD:276811 5/29 (17%)
PPR repeat 464..493 CDD:276811 6/30 (20%)
PPR repeat 501..528 CDD:276811 5/29 (17%)
PPR repeat 534..563 CDD:276811 3/28 (11%)
PPR repeat 569..598 CDD:276811 6/28 (21%)
PPR 570..603 CDD:273253 6/32 (19%)
PPR_2 603..650 CDD:463778 8/46 (17%)
PPR repeat 604..630 CDD:276811 6/25 (24%)
PPR_2 637..683 CDD:463778 6/36 (17%)
PPR repeat 639..664 CDD:276811 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.

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