DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT2G36240

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_181166.3	Gene:	AT2G36240 / 818196	AraportID:	AT2G36240	Length:	497	Species:	Arabidopsis thaliana

Alignment Length:	400	Identity:	82/400 - (20%)
Similarity:	154/400 - (38%)	Gaps:	80/400 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   154 IKDHLKANRLNEAIAVLE--QRMLKEDRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQ 216
            |..:.:|.:::.|:...:  :|::.   .||:..:||.:::|..|:|...||...|.:|.:...:
plant   164 IDAYCRARKMDYALLAFDTMKRLID---GKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAK 225

  Fly   217 VTGGTYTSLFNACANAPSVSDGLAKAQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLA 281
            ....|:..|.|....:......|   .:.|| |.|||.||||.::|.:|:.:...|.::....:|
plant   226 PDVCTFNILINGYCRSSKFDLAL---DLFRE-MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMA 286

  Fly   282 DEMMERQLELNADTFNFLLQACASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLRCARDCGFG 346
            .||:|.....:..|...|:..............|:.  ::|.:.:.|..:.:.:::.  :.||..
plant   287 YEMIELGCRFSEATCEILVDGLCREGRVDDACGLVL--DLLNKRVLPSEFDYGSLVE--KLCGEN 347

  Fly   347 DLDSMREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVATTASELELPNLLLPQ 411
            ......|:::::            .:|||   .|...|.||.:....:...|..
plant   348 KAVRAMEMMEEL------------WKKGQ---TPCFIACTTLVEGLRKSGRTEK----------- 386

  Fly   412 PHLGSLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEVI----PPTNAAEKQL 472
                                    .:||:|.|....|.||..||..:|..:    ..|:|...:|
plant   387 ------------------------ASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRL 427

  Fly   473 LTFVRKIGLKADIDFFNILIK---KRSMRFDYESAKEVLLMIRTAGLRPDIVTY-----GVLALG 529
            |...:  |.:.|...:::|:.   |...|.:.|.....:|   ...:.|||.||     |:...|
plant   428 LASSK--GYEPDETTYHVLVSGFTKEGRRKEGEVLVNEML---DKDMLPDIFTYNRLMDGLSCTG 487

  Fly   530 CRTQEEAREL 539
            ..::::.|.|
plant   488 KFSRKQVRML 497

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	8/40 (20%)
		PPR_2	182..231	CDD:289786	13/48 (27%)
		PPR	185..215	CDD:279828	9/29 (31%)
		PPR repeat	186..213	CDD:276811	9/26 (35%)
		PPR repeat	219..252	CDD:276811	7/32 (22%)
		PPR_1	252..284	CDD:289614	10/31 (32%)
		PPR_2	256..304	CDD:289786	12/47 (26%)
		PPR repeat	258..287	CDD:276811	7/28 (25%)
		PPR repeat	293..324	CDD:276811	4/30 (13%)
		PPR repeat	330..357	CDD:276811	3/26 (12%)
		PPR repeat	485..514	CDD:276811	5/31 (16%)
		PPR repeat	552..576	CDD:276811
AT2G36240	NP_181166.3	PPR repeat	164..186	CDD:276811	3/21 (14%)
		PPR_2	191..240	CDD:289786	13/48 (27%)
		PPR	195..228	CDD:273253	9/32 (28%)
		PPR repeat	195..222	CDD:276811	9/26 (35%)
		PPR_2	226..273	CDD:289786	16/50 (32%)
		PPR repeat	228..257	CDD:276811	7/32 (22%)
		PPR	229..263	CDD:273253	12/37 (32%)
		PPR_1	257..289	CDD:289614	10/31 (32%)
		PPR_2	261..310	CDD:289786	12/48 (25%)
		PPR repeat	263..291	CDD:276811	7/27 (26%)
		PPR repeat	298..327	CDD:276811	4/30 (13%)
		PPR repeat	333..362	CDD:276811	3/42 (7%)
		PPR_2	366..414	CDD:289786	15/82 (18%)
		PPR	369..403	CDD:273253	10/68 (15%)
		PPR repeat	370..397	CDD:276811	8/61 (13%)
		PPR repeat	403..432	CDD:276811	7/28 (25%)
		PPR	432..464	CDD:295754	6/33 (18%)
		PPR_2	436..483	CDD:289786	11/49 (22%)
		PPR repeat	438..467	CDD:276811	5/31 (16%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000